Protein Alignment SkpF and SK18

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_563864.2
• Gene: SK18 / 837562
• AraportID: AT1G10230
• Length: 158
• Species: Arabidopsis thaliana
• Alignment Length: 155
• Identity: 69/155 - (44%)
• Similarity: 96/155 - (61%)
• Gaps: 10/155 - (6%)

  Fly     4 IKLQSSDGEIFETDIETAKCSSTIKTLLED-CPVEAENDTLIPLPNVNSTILKKVLIWAKHHRED 67
            |.|.|||||.||.|...|:....|..::|| |..||     |||.||...||.|::.:||.|..:
plant     6 ILLTSSDGESFEIDEAVARKFLIIVHMMEDNCAGEA-----IPLENVTGDILSKIIEYAKMHVNE 65

  Fly    68 IAEENEEEAAKSVAVQITPWDAEFL-SMDQGTLFELILAANYLDIPNLLNAACMTVANMIKGRTT 131
            .:||:|:|.||.   .:..|||:|: .:|..|:|::|||||||:...||..|..|||:.||.:|.
plant    66 PSEEDEDEEAKK---NLDSWDAKFMEKLDLETIFKIILAANYLNFEGLLGFASQTVADYIKDKTP 127

  Fly   132 EEIRQTFHITNDFSPSEEDLMTMES 156
            ||:|:.|:|.|||:|.||:.:..|:
plant   128 EEVREIFNIENDFTPEEEEEIRKEN 152

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	54/123 (44%)
		Skp1	112..157	CDD:460222	21/45 (47%)
SK18	NP_563864.2	BTB_POZ_SKP1	5..122	CDD:349631	54/123 (44%)
		Skp1	108..154	CDD:460222	21/45 (47%)