Protein Alignment SkpF and AT5G42190

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_568603.1
• Gene: AT5G42190 / 834224
• AraportID: AT5G42190
• Length: 171
• Species: Arabidopsis thaliana
• Alignment Length: 167
• Identity: 83/167 - (49%)
• Similarity: 106/167 - (63%)
• Gaps: 19/167 - (11%)

  Fly     4 IKLQSSDGEIFETDIETAKCSSTIKTLLE-DCPVEAENDTLIPLPNVNSTILKKVLIWAKHHRED 67
            |.|:|||||.||.|...|..|.|||.::| ||     .|..||||||.|.||.||:.:.|.|.|
plant     7 ITLKSSDGENFEIDEAVALESQTIKHMIEDDC-----TDNGIPLPNVTSKILSKVIEYCKRHVE- 65

  Fly    68 IAEENEEEAAKSVAVQIT------------PWDAEFLSMDQGTLFELILAANYLDIPNLLNAACM 120
            .||::|..|..:.|...|            .||:||:.:||||||:||||||||:|..||:..|.
plant    66 AAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGLLDLTCQ 130

  Fly   121 TVANMIKGRTTEEIRQTFHITNDFSPSEEDLMTMESE 157
            |||:||||:|.||||:||:|.|||:|.||:.:..|::
plant   131 TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQ 167

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	64/134 (48%)
		Skp1	112..157	CDD:460222	25/44 (57%)
AT5G42190	NP_568603.1	BTB_POZ_SKP1	6..136	CDD:349631	64/134 (48%)
		Skp1	122..169	CDD:460222	25/46 (54%)