Protein Alignment SkpF and SK12

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_567967.1
• Gene: SK12 / 829598
• AraportID: AT4G34470
• Length: 152
• Species: Arabidopsis thaliana
• Alignment Length: 156
• Identity: 70/156 - (44%)
• Similarity: 96/156 - (61%)
• Gaps: 13/156 - (8%)

  Fly     3 VIKLQSSDGEIFETDIETAKCSSTIKTLLE-DCPVEAENDTLIPLPNVNSTILKKVLIWAKHHRE 66
            :|.|.||||:.||.:...|..|.||..::| ||..:.     |||.||.|.||.||:.:.|.:..
plant     5 MIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADG-----IPLANVESKILVKVIEYCKKYHV 64

  Fly    67 DIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANMIKGRTT 131
            |.|....||       .:..||.:|:.::|.|:||||||||||:|.:|.:..|.|||:||||:|.
plant    65 DEANPISEE-------DLNKWDEKFMDLEQSTIFELILAANYLNIKSLFDLTCQTVADMIKGKTP 122

  Fly   132 EEIRQTFHITNDFSPSEEDLMTMESE 157
            ||||.||:|.|||:|.||:.:..|::
plant   123 EEIRSTFNIENDFTPEEEEAVRKENQ 148

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	51/123 (41%)
		Skp1	112..157	CDD:460222	24/44 (55%)
SK12	NP_567967.1	BTB_POZ_SKP1	5..117	CDD:349631	51/123 (41%)
		Skp1	103..150	CDD:460222	24/46 (52%)