Protein Alignment SkpF and SK13

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_567090.1
• Gene: SK13 / 825171
• AraportID: AT3G60010
• Length: 154
• Species: Arabidopsis thaliana
• Alignment Length: 160
• Identity: 63/160 - (39%)
• Similarity: 95/160 - (59%)
• Gaps: 18/160 - (11%)

  Fly     3 VIKLQSSDGEIFETDIETAKCSSTIKTLLE-DCPVEAENDTLIPLPNVNSTILKKVLIWAKHH-- 64
            ::.|.|||||.|:.:...|..|.||..::| ||....     :|:.||...||.||:.:.|.|
plant     4 MVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANG-----VPIANVTGVILSKVIEYCKKHVV 63

  Fly    65 REDIAEENEEEAAKSVAVQITPWDAEFL-SMDQ-GTLFELILAANYLDIPNLLNAACMTVANMIK 127
            .:...||:::|..|        |||||: :::| .|||:::||||||:|.:||:..|.|||:||.
plant    64 SDSPTEESKDELKK--------WDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVADMIT 120

  Fly   128 GRTTEEIRQTFHITNDFSPSEEDLMTMESE 157
            |:..:|||....|.|||:|.||:.:..|::
plant   121 GKKPDEIRALLGIENDFTPEEEEEIRKENQ 150

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	49/127 (39%)
		Skp1	112..157	CDD:460222	20/44 (45%)
SK13	NP_567090.1	BTB_POZ_SKP1	4..119	CDD:349631	49/127 (39%)
		Skp1	105..152	CDD:460222	20/46 (43%)