Protein Alignment SkpF and SK15

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_566773.1
• Gene: SK15 / 822152
• AraportID: AT3G25650
• Length: 177
• Species: Arabidopsis thaliana
• Alignment Length: 174
• Identity: 67/174 - (38%)
• Similarity: 95/174 - (54%)
• Gaps: 20/174 - (11%)

  Fly     4 IKLQSSDGEIFETDIETAKCSSTIKTLLE-DCPVEAENDTLIPLPNVNSTILKKVLIWAKHHRED 67
            |.|.|||||.|:.:...|:....:|.||| ||.:..     |||.||...||..||.:.|.|.:|
plant     6 IVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINE-----IPLQNVTGNILSIVLEYCKKHVDD 65

  Fly    68 IAEENEEEAAK------SVAVQITPWDAEFL-SMDQGTLFELILAANYLDIPNLLNAACMTVANM 125
            :.:::..|..|      .....:..|||||: ::|..|:|:||||||||::..||...|.|||:.
plant    66 VVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNIDMETIFKLILAANYLNVEGLLGLTCQTVADY 130

  Fly   126 IKGRTTEEIRQTFHITNDFSPSEED-------LMTMESEVPQED 162
            ||.:|.||:|:.|:|.|||:..||:       ....|::...||
plant   131 IKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAFEADTKHED 174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	51/129 (40%)
		Skp1	112..157	CDD:460222	20/51 (39%)
SK15	NP_566773.1	BTB_POZ_SKP1	5..131	CDD:349631	51/129 (40%)
		Skp1	117..165	CDD:460222	19/47 (40%)