Protein Alignment SkpF and SK10

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_566695.1
• Gene: SK10 / 821740
• AraportID: AT3G21860
• Length: 152
• Species: Arabidopsis thaliana
• Alignment Length: 155
• Identity: 62/155 - (40%)
• Similarity: 87/155 - (56%)
• Gaps: 13/155 - (8%)

  Fly     4 IKLQSSDGEIFETDIETA-KCSSTIKTLLEDCPVEAENDTLIPLPNVNSTILKKVLIWAKHHRED 67
            |.|:||||..||.:.|.| :|.:......:||     .|..||||.|...||:.|:.:...|..|
plant     6 IILKSSDGHSFEVEEEAACQCQTIAHMSEDDC-----TDNGIPLPEVTGKILEMVIEYCNKHHVD 65

  Fly    68 IAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANMIKGRTTE 132
            .|....:|..|.       ||.||:...|.|:|:||:|||||:|.:||:.||.|||:|||..|.|
plant    66 AANPCSDEDLKK-------WDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDNTVE 123

  Fly   133 EIRQTFHITNDFSPSEEDLMTMESE 157
            ..|:.|:|.||::..||:.:..|::
plant   124 HTRKFFNIENDYTHEEEEAVRRENQ 148

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	49/122 (40%)
		Skp1	112..157	CDD:460222	20/44 (45%)
SK10	NP_566695.1	BTB_POZ_SKP1	5..117	CDD:349631	49/122 (40%)
		Skp1	103..149	CDD:460222	20/46 (43%)