DRSC/TRiP Functional Genomics Resources

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Protein Alignment SkpF and SK7

DIOPT Version :10

Sequence 1:NP_611796.1 Gene:SkpF / 37713 FlyBaseID:FBgn0034863 Length:171 Species:Drosophila melanogaster
Sequence 2:NP_566693.1 Gene:SK7 / 821738 AraportID:AT3G21840 Length:125 Species:Arabidopsis thaliana


Alignment Length:124 Identity:49/124 - (39%)
Similarity:69/124 - (55%) Gaps:13/124 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IKLQSSDGEIFETDIETAKCSSTIKTLLE-DCPVEAENDTLIPLPNVNSTILKKVLIWAKHHRED 67
            |.|:||||::||.:.|||:...||..::| :|     .|.:||:.||.|.||:.|:.:...|..|
plant     6 IMLKSSDGKMFEIEEETARQCQTIAHMIEAEC-----TDNVIPVSNVTSEILEMVIEYCNKHHVD 65

  Fly    68 IAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANMI 126
            .|....:|..|.       ||.||:..||.|:|.|:.||..|.|.:||..|..|||:|:
plant    66 AANPCSDEDLKK-------WDKEFMEKDQYTIFHLMNAAYDLHIKSLLALAYQTVADMV 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SkpFNP_611796.1 BTB_POZ_SKP1 3..126 CDD:349631 48/122 (39%)
Skp1 112..157 CDD:460222 7/15 (47%)
SK7NP_566693.1 BTB_POZ_SKP1 5..117 CDD:349631 48/122 (39%)

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