Protein Alignment SkpF and SK8

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_566692.1
• Gene: SK8 / 821737
• AraportID: AT3G21830
• Length: 152
• Species: Arabidopsis thaliana
• Alignment Length: 155
• Identity: 55/155 - (35%)
• Similarity: 89/155 - (57%)
• Gaps: 13/155 - (8%)

  Fly     4 IKLQSSDGEIFETDIETAKCSSTIKTLLE-DCPVEAENDTLIPLPNVNSTILKKVLIWAKHHRED 67
            |.|:||:|:.||.:.|||:...||..::| :|     .|.:|.:..:.|.||:.|:.:...|..|
plant     6 IMLKSSEGKTFEIEEETARQCQTIAHMIEAEC-----TDNVILVLKMTSEILEMVIEYCNKHHVD 65

  Fly    68 IAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANMIKGRTTE 132
            .|....::       .:..||.||:..|:.|:|.|..|||:|:..:||:.|..|||:||||.|.:
plant    66 AANPCSDD-------DLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPK 123

  Fly   133 EIRQTFHITNDFSPSEEDLMTMESE 157
            ::|:.|:|.||.:|.||..:..|::
plant   124 QMREFFNIENDLTPEEEAAIRRENK 148

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	41/122 (34%)
		Skp1	112..157	CDD:460222	20/44 (45%)
SK8	NP_566692.1	BTB_POZ_SKP1	5..117	CDD:349631	41/122 (34%)
		Skp1	103..150	CDD:460222	20/46 (43%)