Protein Alignment SkpF and SK3

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_565604.1
• Gene: SK3 / 817111
• AraportID: AT2G25700
• Length: 163
• Species: Arabidopsis thaliana
• Alignment Length: 171
• Identity: 68/171 - (39%)
• Similarity: 95/171 - (55%)
• Gaps: 30/171 - (17%)

  Fly     3 VIKLQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAENDTLIPLPNVNSTILKKVLIWAKHHRED 67
            :|.|:|||||.||.:...|..|.|||.::||..|    |..||||||...||.||:.:.|.|.|.
plant     7 MIILKSSDGESFEVEEAVAVESQTIKHMIEDDCV----DNGIPLPNVTGAILAKVIEYCKKHVEA 67

  Fly    68 IAE-----------ENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMT 121
            .||           ||.|         :..||.:|:.:|..|||:|:.|||||:|..||:..|..
plant    68 AAEAGGDKDFYGSTENHE---------LKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKA 123

  Fly   122 VANMIKGRTTEEIRQTFHITNDFSPSEEDLMTMESEVPQED 162
            ||:.::|:|..::|:.|:|.||::|.|      |:||..|:
plant   124 VADQMRGKTPAQMREHFNIKNDYTPEE------EAEVRNEN 158

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	55/133 (41%)
		Skp1	112..157	CDD:460222	15/44 (34%)
SK3	NP_565604.1	BTB_POZ_SKP1	7..128	CDD:349631	55/133 (41%)
		Skp1	115..161	CDD:460222	18/50 (36%)