Protein Alignment SkpF and SK16

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_565297.1
• Gene: SK16 / 814848
• AraportID: AT2G03190
• Length: 170
• Species: Arabidopsis thaliana
• Alignment Length: 230
• Identity: 47/230 - (20%)
• Similarity: 80/230 - (34%)
• Gaps: 72/230 - (31%)

  Fly    78 ETTVTSNDRDWNVLDRYNDEQDDRHDRER--WRTSQPFKHERNRYGSSRSPGVPAVQLKVAHQEP 140
            |.|.|:..:|...:...:.| |.:|.:|.  ..|.:|...:|.|.                  ||
plant    28 EETGTNTSQDEGSVTELSQE-DKKHLKEESGTTTCRPKISQRKRV------------------EP 73

  Fly   141 ISIRPRNKNPQIVNVCQTFRFPDNFITQNNATRMVQHQDRVVHQQHPAPEPRRPPLLSPCHSTSR 205
                |.|:....:::.:.:                             |||.|...|.  .....
plant    74 ----PTNEGNNTISLAEKY-----------------------------PEPGRYFKLG--EQIGE 103

  Fly   206 TPVGGFFSMYRRHRNMHSQTSRTLIELVEAEQKMQQQQQTVRSTMGPRGTSN-YGASSHR----- 264
            .|.|..::.:.|.|.|  :.:..:||..|.::.:|.:.:.:....|.....: |||..|:
plant   104 DPNGVIYNGWHRSRRM--EVAIVIIEDQEKQKGIQSEVEVLEMVSGHENIVDFYGAYYHQAPRTP 166

  Fly   265 -LAEESLLAS---SGSETSLDDLSDVRPRLLQGER 295
             |.|...:|:   :|:  :|.||...|..|  |||
plant   167 SLPEGLWIATEFITGA--TLQDLIGTRKTL--GER 197

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	12/49 (24%)
		Skp1	112..157	CDD:460222	7/44 (16%)
SK16	NP_565297.1	BTB_POZ_SKP1	5..132	CDD:349631	29/159 (18%)
		Skp1	118..165	CDD:460222	10/48 (21%)