Protein Alignment SkpF and skp1

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_001016519.1
• Gene: skp1 / 549273
• XenbaseID: XB-GENE-919631
• Length: 163
• Species: Xenopus tropicalis
• Alignment Length: 166
• Identity: 95/166 - (57%)
• Similarity: 119/166 - (71%)
• Gaps: 9/166 - (5%)

  Fly     1 MPVIKLQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAE-NDTLIPLPNVNSTILKKVLIWAKHH 64
            ||.||||||||||||.|:|.||.|.||||:|||..::.| :|..:||||||:.|||||:.|..||
 Frog     1 MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65

  Fly    65 REDIA----EENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANM 125
            ::|..    :||:|:....:.|    ||.|||.:|||||||||||||||||..||:..|.|||||
 Frog    66 KDDPPPPEDDENKEKRTDDIPV----WDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 126

  Fly   126 IKGRTTEEIRQTFHITNDFSPSEEDLMTMESEVPQE 161
            |||:|.||||:||:|.|||:..||..:..|::..:|
 Frog   127 IKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	74/127 (58%)
		Skp1	112..157	CDD:460222	25/44 (57%)
skp1	NP_001016519.1	BTB_POZ_SKP1	4..127	CDD:349631	74/126 (59%)
		Skp1	113..160	CDD:460222	25/46 (54%)