Protein Alignment SkpF and skr-21

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_001366771.1
• Gene: skr-21 / 54162166
• WormBaseID: WBGene00004827
• Length: 176
• Species: Caenorhabditis elegans
• Alignment Length: 173
• Identity: 51/173 - (29%)
• Similarity: 90/173 - (52%)
• Gaps: 28/173 - (16%)

  Fly     2 PVIKLQSSDGEIFETD---IETAKCSSTIKTLLEDCPVEAENDTLIPLP---NVNSTILKKVLIW 60
            ||.|:||.||::|..:   |:.:||.|.:...:        |:.:.|.|   ::.|.:|.|::.|
 Worm     8 PVFKIQSCDGQVFAVEDWFIQKSKCFSVVLAQM--------NNLVQPHPLKTSICSFVLVKIIEW 64

  Fly    61 AKHHREDIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANM 125
            ..|||.:     :::.|:.:   :|.||.:|:..:...|..|..||..|:|..||:.||..|:.|
 Worm    65 CYHHRNE-----DQDHAQRI---LTAWDVQFIRTNSAILLHLAEAAFRLEIVGLLDVACRAVSIM 121

  Fly   126 IKGRTTEEIRQTFHITNDFSPSE-----EDLMTMESEVPQEDE 163
            : |||..|::....:....|||:     ||::.:|.:|.:.:|
 Worm   122 L-GRTLNEVKLMLRVGGVESPSDEEDSLEDVLELEVDVDENEE 163

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	37/128 (29%)
		Skp1	112..157	CDD:460222	16/49 (33%)
skr-21	NP_001366771.1	Skp1	7..107	CDD:214704	32/114 (28%)