Protein Alignment SkpF and skp1

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_957037.1
• Gene: skp1 / 393716
• ZFINID: ZDB-GENE-040426-1707
• Length: 163
• Species: Danio rerio
• Alignment Length: 166
• Identity: 94/166 - (56%)
• Similarity: 119/166 - (71%)
• Gaps: 9/166 - (5%)

  Fly     1 MPVIKLQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAE-NDTLIPLPNVNSTILKKVLIWAKHH 64
            ||.|||||||||:||.|:|.||.|.||||:|||..::.| :|..:||||||:.|||||:.|..||
Zfish     1 MPTIKLQSSDGEMFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 65

  Fly    65 REDIA----EENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANM 125
            ::|..    :||:|:....:.|    ||.|||.:|||||||||||||||||..||:..|.|||||
Zfish    66 KDDPPPPEDDENKEKRTDDIPV----WDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 126

  Fly   126 IKGRTTEEIRQTFHITNDFSPSEEDLMTMESEVPQE 161
            |||:|.||||:||:|.|||:..||..:..|::..:|
Zfish   127 IKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	73/127 (57%)
		Skp1	112..157	CDD:460222	25/44 (57%)
skp1	NP_957037.1	BTB_POZ_SKP1	3..127	CDD:349631	73/127 (57%)
		Skp1	113..160	CDD:460222	25/46 (54%)