Protein Alignment SkpF and Skp1

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: XP_063124657.1
• Gene: Skp1 / 287280
• RGDID: 1359648
• Length: 186
• Species: Rattus norvegicus
• Alignment Length: 154
• Identity: 93/154 - (60%)
• Similarity: 113/154 - (73%)
• Gaps: 9/154 - (5%)

  Fly     1 MPVIKLQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAE-NDTLIPLPNVNSTILKKVLIWAKHH 64
            ||.||||||||||||.|:|.||.|.||||:|||..::.| :|..:||||||:.|||||:.|..||
  Rat     3 MPTIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHH 67

  Fly    65 REDIA----EENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANM 125
            ::|..    :||:|:....:.|    ||.|||.:|||||||||||||||||..||:..|.|||||
  Rat    68 KDDPPPPEDDENKEKRTDDIPV----WDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 128

  Fly   126 IKGRTTEEIRQTFHITNDFSPSEE 149
            |||:|.||||:||:|.|||:..||
  Rat   129 IKGKTPEEIRKTFNIKNDFTEEEE 152

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	74/127 (58%)
		Skp1	112..157	CDD:460222	24/38 (63%)
Skp1	XP_063124657.1	None