Protein Alignment SkpF and skp1

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_595455.1
• Gene: skp1 / 2540917
• PomBaseID: SPBC409.05
• Length: 161
• Species: Schizosaccharomyces pombe
• Alignment Length: 161
• Identity: 78/161 - (48%)
• Similarity: 106/161 - (65%)
• Gaps: 9/161 - (5%)

  Fly     1 MPVIKLQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAENDTLIPLPNVNSTILKKVLIWAKHHR 65
            |..|||.|||.|.|..|...|:.|..||.:|||.   .|.:..||||||:|.:|:|||.|.:||:
pombe     1 MSKIKLISSDNEEFVVDQLIAERSMLIKNMLEDV---GEINVPIPLPNVSSNVLRKVLEWCEHHK 62

  Fly    66 EDIAEENEEEA----AKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANMI 126
            .|:....|||:    .||  ..|..||.:|:::||..|||::||:|||||..||:..|.||||||
pombe    63 NDLYSGTEEESDIRLKKS--TDIDEWDRKFMAVDQEMLFEIVLASNYLDIKPLLDTGCKTVANMI 125

  Fly   127 KGRTTEEIRQTFHITNDFSPSEEDLMTMESE 157
            :|::.|:||:||:|.|||:|.||:.:..|:|
pombe   126 RGKSPEDIRKTFNIPNDFTPEEEEQIRKENE 156

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	60/126 (48%)
		Skp1	112..157	CDD:460222	23/44 (52%)
skp1	NP_595455.1	SKP1	1..161	CDD:227528	78/161 (48%)