Protein Alignment SkpF and skr-6

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_507574.2
• Gene: skr-6 / 191763
• WormBaseID: WBGene00004812
• Length: 106
• Species: Caenorhabditis elegans
• Alignment Length: 106
• Identity: 41/106 - (38%)
• Similarity: 61/106 - (57%)
• Gaps: 9/106 - (8%)

  Fly    44 IPLPNVNSTILKKVLIWAKHHREDIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANY 108
            |||..|::.|.:|::.:.:|........|.|         |..||:|||.:||.|||:|:|||||
 Worm     4 IPLTKVDAKIFEKIIEYCEHQGTPRPLLNGE---------IGEWDSEFLKLDQNTLFDLVLAANY 59

  Fly   109 LDIPNLLNAACMTVANMIKGRTTEEIRQTFHITNDFSPSEE 149
            |:|.||.:.....:|||:|..|..:||..|.::|..|.:|:
 Worm    60 LNIENLFDVTTQFIANMMKNNTPSQIRARFGVSNKHSSAED 100

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	32/81 (40%)
		Skp1	112..157	CDD:460222	13/38 (34%)
skr-6	NP_507574.2	BTB_POZ	<1..77	CDD:453885	32/81 (40%)
		Skp1	65..>93	CDD:460222	9/27 (33%)