Protein Alignment SkpF and skr-20

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_510192.1
• Gene: skr-20 / 181445
• WormBaseID: WBGene00004826
• Length: 173
• Species: Caenorhabditis elegans
• Alignment Length: 155
• Identity: 46/155 - (29%)
• Similarity: 82/155 - (52%)
• Gaps: 11/155 - (7%)

  Fly     2 PVIKLQSSDGEIFETDIETAKCSSTIKTLLEDCPV-----EAENDTLIPLPNVNSTILKKVLIWA 61
            |:.||:|.||:||..:....|..:.|.....|..|     |..:..|:|.   :|:|::.|:.|.
 Worm     8 PLYKLKSEDGQIFNVERGPMKFCAFINQKFIDHGVNDRNCERADPILVPF---HSSIVQAVIEWL 69

  Fly    62 KHHREDIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANMI 126
            .|::::.....:   :|......:.||.:|.:::.|.||.|:.|::.|.:.:|:|..|...|.:|
 Worm    70 YHYQDNPLARRD---SKIRYHDFSEWDKQFFNVESGVLFALLNASHALGVEDLMNMGCAAAAELI 131

  Fly   127 KGRTTEEIRQTFHITNDFSPSEEDL 151
            :|::|||||:.:.|.:|....||.|
 Worm   132 RGKSTEEIRKIYGIRSDEEQMEEAL 156

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	33/127 (26%)
		Skp1	112..157	CDD:460222	16/40 (40%)
skr-20	NP_510192.1	Skp1	7..116	CDD:214704	30/113 (27%)
		Skp1	117..>155	CDD:460222	14/37 (38%)