Protein Alignment SkpF and skr-3

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_507059.1
• Gene: skr-3 / 180081
• WormBaseID: WBGene00004809
• Length: 167
• Species: Caenorhabditis elegans
• Alignment Length: 156
• Identity: 69/156 - (44%)
• Similarity: 95/156 - (60%)
• Gaps: 6/156 - (3%)

  Fly     4 IKLQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAENDT---LIPLPNVNSTILKKVLIWAKHHR 65
            |||.|||.:.|....:....|.||..::::..:|....|   .|||..|.||||:|::.|.:||.
 Worm    10 IKLTSSDDKTFTVSRKVISQSKTITDIIQNLGIEESGSTSEDTIPLQKVTSTILEKIITWCEHHA 74

  Fly    66 EDIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANMIKGRT 130
            :|..::.:|   ....|.|:.|||||:.:|||||||:|||||||||..||:.....||||:||:|
 Worm    75 DDEPKKVDE---NKKTVDISEWDAEFMKVDQGTLFEIILAANYLDIRGLLDVTTQNVANMMKGKT 136

  Fly   131 TEEIRQTFHITNDFSPSEEDLMTMES 156
            ..:||..|:|.||||..|.:.|..|:
 Worm   137 PSQIRTLFNIENDFSEEEREAMKKEN 162

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	54/124 (44%)
		Skp1	112..157	CDD:460222	20/45 (44%)
skr-3	NP_507059.1	BTB_POZ_SKP1	10..132	CDD:349631	54/124 (44%)
		Skp1	118..165	CDD:460222	20/45 (44%)