Protein Alignment SkpF and skr-14

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_504220.4
• Gene: skr-14 / 178839
• WormBaseID: WBGene00004820
• Length: 168
• Species: Caenorhabditis elegans
• Alignment Length: 169
• Identity: 57/169 - (33%)
• Similarity: 87/169 - (51%)
• Gaps: 22/169 - (13%)

  Fly     5 KLQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAEN-DTLIPLP--NVNSTILKKVLIWAKHHRE 66
            |:.|:||.:.:...:..:.|.|:..|:|:.....|| :|..|:|  |||...::||..|.:.|..
 Worm    16 KIISNDGVVTKMSEKAVQQSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMEKVAEWCEKHNA 80

  Fly    67 DIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANMIKGRTT 131
            |...|:.....|::.  |..||.:||.::...||:||||:|:|||..|:...|.||:||.||:||
 Worm    81 DAIPEDNMNVLKTLT--IPEWDQKFLKIEDEALFDLILASNFLDIKGLMYYGCKTVSNMAKGKTT 143

  Fly   132 EEIRQTFHITNDFSPSEEDLMTMESEVPQEDEAIEYGEI 170
            .|:|:.|.|..|                 |.:|.|.|.:
 Worm   144 AELREIFGINTD-----------------EQDAAEGGAV 165

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	43/123 (35%)
		Skp1	112..157	CDD:460222	15/44 (34%)
skr-14	NP_504220.4	BTB_POZ_SKP1	14..138	CDD:349631	43/123 (35%)
		Skp1	124..>161	CDD:460222	17/53 (32%)