Protein Alignment SkpF and skr-12

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_001367151.1
• Gene: skr-12 / 178496
• WormBaseID: WBGene00004818
• Length: 172
• Species: Caenorhabditis elegans
• Alignment Length: 160
• Identity: 59/160 - (36%)
• Similarity: 90/160 - (56%)
• Gaps: 6/160 - (3%)

  Fly     3 VIKLQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAEN-DTLIPLP--NVNSTILKKVLIWAKHH 64
            |.|:.||||.:.:...:..:.|.|:..|:|:.....|| :|..|:|  |||...:.||..|.:.|
 Worm    14 VYKIISSDGVVSKMSEKAVQQSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMAKVAEWCEKH 78

  Fly    65 REDIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANMIKGR 129
            :.|...|:.....|::.  |..||.:||.::...||:||||:|:|||..|:...|.||:||.||:
 Worm    79 KADAIPEDNMNVLKTLT--IPEWDQKFLKIEDEALFDLILASNFLDIKGLMYFGCKTVSNMAKGK 141

  Fly   130 TTEEIRQTFHI-TNDFSPSEEDLMTMESEV 158
            ||.|:|:.|.| |::...:||......:||
 Worm   142 TTAELREIFGINTDEQDAAEETAQRAAAEV 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	45/125 (36%)
		Skp1	112..157	CDD:460222	17/45 (38%)
skr-12	NP_001367151.1	BTB_POZ_SKP1	14..138	CDD:349631	45/125 (36%)
		Skp1	124..169	CDD:460222	17/44 (39%)