Protein Alignment SkpF and skr-8

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_503044.1
• Gene: skr-8 / 178495
• WormBaseID: WBGene00004814
• Length: 194
• Species: Caenorhabditis elegans
• Alignment Length: 171
• Identity: 58/171 - (33%)
• Similarity: 89/171 - (52%)
• Gaps: 24/171 - (14%)

  Fly     2 PVI-----KLQSSDGEIFETDIETAKCSSTIKTLLEDC-PVEAENDTLIPLPNVNSTILKKVLIW 60
            ||:     |::|:||::||...|..|.|:.:..|:..| |.:..:...||:.||...|||.|:.|
 Worm    16 PVVAPIMYKVESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVTGNILKMVIEW 80

  Fly    61 AKHHREDIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANM 125
            .:.|:.:.....::...|:  :.:..||..||.:|...||:||:|.||||:|.|:|..|..||||
 Worm    81 CEKHKGEALPVEDDSVPKN--INVPEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVANM 143

  Fly   126 IKGRTTEEIRQTFHITNDFSPSEEDLMTMESEVPQEDEAIE 166
            ..|::.:|:|..|.|..|                :||||.|
 Worm   144 AIGKSPDELRIIFAIPTD----------------EEDEAAE 168

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	45/128 (35%)
		Skp1	112..157	CDD:460222	14/44 (32%)
skr-8	NP_503044.1	BTB_POZ_SKP1	22..144	CDD:349631	44/123 (36%)
		Skp1	130..>161	CDD:460222	13/30 (43%)