Protein Alignment SkpF and skr-9

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_503043.1
• Gene: skr-9 / 178494
• WormBaseID: WBGene00004815
• Length: 194
• Species: Caenorhabditis elegans
• Alignment Length: 171
• Identity: 58/171 - (33%)
• Similarity: 87/171 - (50%)
• Gaps: 24/171 - (14%)

  Fly     2 PVI-----KLQSSDGEIFETDIETAKCSSTIKTLLEDC-PVEAENDTLIPLPNVNSTILKKVLIW 60
            ||:     |::|:||::||...|..|.|:.:..|:..| |.:..:...||:.||...|||.|:.|
 Worm    16 PVVAPIMYKVESNDGKVFEISDEAVKQSNILSNLISTCAPEDVASMDPIPITNVIGNILKMVIEW 80

  Fly    61 AKHHREDIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANM 125
            .:.|:.:.....::...|.  |.:..||..||.:|...||:||:|.||||:|.|:|..|..||.|
 Worm    81 CEKHKGEALPVEDDSVPKH--VNVPEWDTNFLKIDNDVLFDLIVACNYLDVPGLMNYGCKIVAMM 143

  Fly   126 IKGRTTEEIRQTFHITNDFSPSEEDLMTMESEVPQEDEAIE 166
            ..|::.:|:|..|.|..|                :||||.|
 Worm   144 AIGKSPDELRIIFAIPTD----------------EEDEAAE 168

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	45/128 (35%)
		Skp1	112..157	CDD:460222	13/44 (30%)
skr-9	NP_503043.1	BTB_POZ_SKP1	22..144	CDD:349631	44/123 (36%)
		Skp1	130..>161	CDD:460222	12/30 (40%)