Protein Alignment SkpF and skr-10

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_502902.1
• Gene: skr-10 / 178447
• WormBaseID: WBGene00004816
• Length: 192
• Species: Caenorhabditis elegans
• Alignment Length: 167
• Identity: 58/167 - (34%)
• Similarity: 88/167 - (52%)
• Gaps: 20/167 - (11%)

  Fly     2 PVI-KLQSSDGEIFETDIETAKCSSTIKTLLEDC-PVEAENDTLIPLPNVNSTILKKVLIWAKHH 64
            |:: |::|:||.:||...|..|.|:|:..|:..| |.:..:...||:.||...|||.|:.|.:.|
 Worm    18 PIMYKVESNDGTVFEISDEAVKQSNTLSNLISTCAPEDVASMDPIPITNVTGNILKMVIEWCEKH 82

  Fly    65 REDIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANMIKGR 129
            :.:....:::...|.:.|  ..||..||.:|...||:||:|.||||:|.|:|..|..||.|..|:
 Worm    83 KGEALPVDDDSVPKHITV--PEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYGCKMVAMMAIGK 145

  Fly   130 TTEEIRQTFHITNDFSPSEEDLMTMESEVPQEDEAIE 166
            :.:|:|..|.|..|                :||||.|
 Worm   146 SPDELRIIFAIPTD----------------EEDEAAE 166

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	45/124 (36%)
		Skp1	112..157	CDD:460222	13/44 (30%)
skr-10	NP_502902.1	BTB_POZ_SKP1	20..142	CDD:349631	45/123 (37%)
		Skp1	128..>159	CDD:460222	12/30 (40%)