Protein Alignment SkpF and skr-17

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_001379551.1
• Gene: skr-17 / 174257
• WormBaseID: WBGene00004823
• Length: 180
• Species: Caenorhabditis elegans
• Alignment Length: 147
• Identity: 52/147 - (35%)
• Similarity: 79/147 - (53%)
• Gaps: 15/147 - (10%)

  Fly     3 VIKLQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAEN-DTLIPLP--NVNSTILKKVLIWAKHH 64
            :::|.||||.:.:.||.....|||:...:.:...:.|. ..|.|:|  ||....||.::.|...|
 Worm    24 LLQLTSSDGHLLQGDIRALLLSSTLAATIRELGYDKEYCAELKPVPVNNVVGFTLKLLIEWCDKH 88

  Fly    65 RED-----IAEENEEEAAKSVAVQITPWDAEFLS-MDQGTLFELILAANYLDIPNLLNAACMTVA 123
            :||     :||::::.      :.|..||..||| :....||:||.||.:||:..|:|..|.|||
 Worm    89 KEDDPAIALAEKDKKN------ICIPSWDRHFLSRLPMSNLFDLITAAYHLDVTGLINYGCKTVA 147

  Fly   124 NMIKGRTTEEIRQTFHI 140
            |..||:..||:|:.|.|
 Worm   148 NSAKGKNAEEMRELFGI 164

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	45/131 (34%)
		Skp1	112..157	CDD:460222	14/29 (48%)
skr-17	NP_001379551.1	BTB_POZ_SKP1	24..150	CDD:349631	45/131 (34%)
		Skp1	137..>166	CDD:460222	14/28 (50%)