Protein Alignment SkpF and skr-15

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_494662.1
• Gene: skr-15 / 173729
• WormBaseID: WBGene00004821
• Length: 184
• Species: Caenorhabditis elegans
• Alignment Length: 154
• Identity: 47/154 - (30%)
• Similarity: 81/154 - (52%)
• Gaps: 13/154 - (8%)

  Fly     2 PVI--KLQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAEN-DTLIPLP--NVNSTILKKVLIWA 61
            ||:  .::|:|..:.:...:..|.|:|:...:.:....||| ::::|:|  .||...||.|:.|.
 Worm    17 PVVYYSIESNDRVVLKISEQAIKQSATLSNSITNLGYSAENAESMVPIPIEKVNGKTLKLVVEWC 81

  Fly    62 KHHREDIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANMI 126
            :||:.|..    .||..|....:..||.:|:.::...|.:|:.|:|:|::..||...|..:|.:.
 Worm    82 EHHKADPV----PEAYPSGNTVLPVWDRKFVDIEHDALTDLVNASNFLEVMTLLTYCCKFIAGLA 142

  Fly   127 KGRTTEEIRQTFHITNDFSPSEED 150
            ||.:.||:|..|.|..|    |||
 Worm   143 KGMSPEEMRVFFCIPTD----EED 162

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	35/127 (28%)
		Skp1	112..157	CDD:460222	15/39 (38%)
skr-15	NP_494662.1	BTB_POZ_SKP1	20..139	CDD:349631	33/122 (27%)
		Skp1	130..175	CDD:460222	15/37 (41%)