Protein Alignment SkpF and skr-1

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_492513.1
• Gene: skr-1 / 172775
• WormBaseID: WBGene00004807
• Length: 176
• Species: Caenorhabditis elegans
• Alignment Length: 157
• Identity: 81/157 - (51%)
• Similarity: 103/157 - (65%)
• Gaps: 5/157 - (3%)

  Fly     4 IKLQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAENDT---LIPLPNVNSTILKKVLIWAKHHR 65
            ||:.|||.|||.......:.|:||.|||.|..::.|..|   .||:.||.::|||||:.|..||.
 Worm    16 IKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISWCNHHH 80

  Fly    66 ED-IAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANMIKGR 129
            .| |:.|:.:...|... .|..||.|||.:|||||||||||||||||..||:..|.||||||||:
 Worm    81 SDPISTEDSDNREKRTD-DIGSWDVEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGK 144

  Fly   130 TTEEIRQTFHITNDFSPSEEDLMTMES 156
            :.||||:||:|.|||:|.||:.:..|:
 Worm   145 SPEEIRRTFNIKNDFTPEEEEQIRKEN 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	63/125 (50%)
		Skp1	112..157	CDD:460222	25/45 (56%)
skr-1	NP_492513.1	BTB_POZ_SKP1	16..141	CDD:349631	63/125 (50%)
		Skp1	127..174	CDD:460222	25/45 (56%)