Protein Alignment SkpF and skr-2

DIOPT Version :10

• Sequence 1: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Sequence 2: NP_492512.1
• Gene: skr-2 / 172773
• WormBaseID: WBGene00004808
• Length: 174
• Species: Caenorhabditis elegans
• Alignment Length: 157
• Identity: 74/157 - (47%)
• Similarity: 99/157 - (63%)
• Gaps: 7/157 - (4%)

  Fly     4 IKLQSSDGEIFETDIETAKCSSTIKTLLEDCPV---EAENDTLIPLPNVNSTILKKVLIW-AKHH 64
            ||:.|||.|||.......:.|:|:.|||.|..:   |..|...||:.||.::|||||:.| .||.
 Worm    16 IKISSSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIPVQNVTASILKKVINWCTKHQ 80

  Fly    65 REDIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANMIKGR 129
            .:.|..|:.|   |.....|..||.:||.:|||||||||||||||||..||:.||.:|||||||:
 Worm    81 SDPIPTEDSE---KKTDGSIQDWDKKFLDIDQGTLFELILAANYLDIKGLLDVACQSVANMIKGK 142

  Fly   130 TTEEIRQTFHITNDFSPSEEDLMTMES 156
            :.:|||:.|:|.:||:..|.:.:..|:
 Worm   143 SPDEIRRAFNIKDDFTAEEREQIRKEN 169

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	61/125 (49%)
		Skp1	112..157	CDD:460222	20/45 (44%)
skr-2	NP_492512.1	BTB_POZ_SKP1	16..139	CDD:349631	61/125 (49%)
		Skp1	125..172	CDD:460222	20/45 (44%)