DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SkpF and C42D4.18

DIOPT Version :10

Sequence 1:NP_611796.1 Gene:SkpF / 37713 FlyBaseID:FBgn0034863 Length:171 Species:Drosophila melanogaster
Sequence 2:NP_001255289.1 Gene:C42D4.18 / 13196550 WormBaseID:WBGene00206380 Length:168 Species:Caenorhabditis elegans


Alignment Length:33 Identity:6/33 - (18%)
Similarity:15/33 - (45%) Gaps:4/33 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 KHHREDIAEENEEEAAKSVAV----QITPWDAE 90
            |.:...:.:|.||:....:.:    |:..|:.:
 Worm    98 KRYEARLNKEREEKMKNGLEIIKIDQLEDWNVD 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SkpFNP_611796.1 BTB_POZ_SKP1 3..126 CDD:349631 6/33 (18%)
Skp1 112..157 CDD:460222
C42D4.18NP_001255289.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.