DRSC/TRiP Functional Genomics Resources

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Protein Alignment SkpF and LOC1275570

DIOPT Version :10

Sequence 1:NP_611796.1 Gene:SkpF / 37713 FlyBaseID:FBgn0034863 Length:171 Species:Drosophila melanogaster
Sequence 2:XP_314827.2 Gene:LOC1275570 / 1275570 VectorBaseID:AGAMI1_003102 Length:162 Species:Anopheles gambiae


Alignment Length:161 Identity:94/161 - (58%)
Similarity:124/161 - (77%) Gaps:0/161 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPVIKLQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAENDTLIPLPNVNSTILKKVLIWAKHHR 65
            ||.|||||||||||:||::.||||.||||:|||..::..:|.::|||||||.||:|||.||..|:
Mosquito     1 MPTIKLQSSDGEIFDTDVQIAKCSGTIKTMLEDLGMDEGDDEVVPLPNVNSAILRKVLQWATFHK 65

  Fly    66 EDIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANMIKGRT 130
            :|.....::::.:.....|:.|||:||.:|||||||||||||||||..||:..|.||||||||:|
Mosquito    66 DDPIPVEDDDSKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKT 130

  Fly   131 TEEIRQTFHITNDFSPSEEDLMTMESEVPQE 161
            .||||:||:|.|||:|:||:.:..|:|..:|
Mosquito   131 PEEIRKTFNIKNDFTPAEEEQVRKENEWCEE 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SkpFNP_611796.1 BTB_POZ_SKP1 3..126 CDD:349631 71/122 (58%)
Skp1 112..157 CDD:460222 26/44 (59%)
LOC1275570XP_314827.2 BTB_POZ_SKP1 3..126 CDD:349631 71/122 (58%)
Skp1 112..159 CDD:460222 27/46 (59%)

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