DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or59a and Orco

DIOPT Version :9

Sequence 1:NP_523821.1 Gene:Or59a / 37711 FlyBaseID:FBgn0026384 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_001097687.1 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster


Alignment Length:490 Identity:82/490 - (16%)
Similarity:159/490 - (32%) Gaps:143/490 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RYLGVA-----HFRVENWKNLYVFYSIVSNLLVTLCY-PVHLGISLFR------NRTITEDILNL 72
            :|.|:.     :.|...:..|::......:..:...| .|||...|.:      |..:..:.:|.
  Fly     9 KYTGLVADLMPNIRAMKYSGLFMHNFTGGSAFMKKVYSSVHLVFLLMQFTFILVNMALNAEEVNE 73

  Fly    73 TTFATCTA-----CSVKCLLYAYNIKDVLEMERLLRLLDERVVGPEQRSIYGQVRV-QLRNVLY- 130
            .:..|.|.     |..|.:..|.|.|:......:...::...:..|..:.|..:.: ::|.:.: 
  Fly    74 LSGNTITTLFFTHCITKFIYLAVNQKNFYRTLNIWNQVNTHPLFAESDARYHSIALAKMRKLFFL 138

  Fly   131 VFIGIYMPCALFAELSF-------LFKEERGLMYPAWFP-------FDWLHSTRNYY-IANAYQI 180
            |.:........:..::|       :...|.....|...|       :.|..|...:| |:.|:||
  Fly   139 VMLTTVASATAWTTITFFGDSVKMVVDHETNSSIPVEIPRLPIKSFYPWNASHGMFYMISFAFQI 203

  Fly   181 VGISFQLLQNYVSD---CFPAVVLCLISSHIKMLYNRFEEV--GLDPAR---------------- 224
            ..:.|.::.:.:.|   |...:..|....|:|.:.....|:  .||..|                
  Fly   204 YYVLFSMIHSNLCDVMFCSWLIFACEQLQHLKGIMKPLMELSASLDTYRPNSAALFRSLSANSKS 268

  Fly   225 ----DAEKD-------------------------------------------------------- 229
                :.|||                                                        
  Fly   269 ELIHNEEKDPGTDMDMSGIYSSKADWGAQFRAPSTLQSFGGNGGGGNGLVNGANPNGLTKKQEMM 333

  Fly   230 ----LEACITDHKHILELFRRI----EAFISLPM--------LIQFTVTALNVCIGLAALVFFVS 278
                ::..:..|||::.|...|    .|.:.|.|        |:.:..|.:|   |:....|.| 
  Fly   334 VRSAIKYWVERHKHVVRLVAAIGDTYGAALLLHMLTSTIKLTLLAYQATKIN---GVNVYAFTV- 394

  Fly   279 EPMARMYFIFYSLAMPLQIFPSCFFGTDNEYWFGRLHYAAFSCNWHTQNRSFKRKMMLFVEQSLK 343
                 :.::.|:||   |:|..|.||.........:..||:||:|:..:...|..:.:..:|..|
  Fly   395 -----VGYLGYALA---QVFHFCIFGNRLIEESSSVMEAAYSCHWYDGSEEAKTFVQIVCQQCQK 451

  Fly   344 KSTAVAGGMMRIHLDTFFSTLKGAYSLFTIIIRMR 378
            ..:........:.||.|.|.|....:.|.::::::
  Fly   452 AMSISGAKFFTVSLDLFASVLGAVVTYFMVLVQLK 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or59aNP_523821.1 7tm_6 64..368 CDD:251636 71/422 (17%)
OrcoNP_001097687.1 7tm_6 70..472 CDD:251636 70/413 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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