DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3520 and focad

DIOPT Version :9

Sequence 1:NP_611792.1 Gene:CG3520 / 37708 FlyBaseID:FBgn0034859 Length:1204 Species:Drosophila melanogaster
Sequence 2:NP_001361602.1 Gene:focad / 549009 XenbaseID:XB-GENE-6038577 Length:1812 Species:Xenopus tropicalis


Alignment Length:1419 Identity:287/1419 - (20%)
Similarity:509/1419 - (35%) Gaps:372/1419 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SSVVKLASCLEKIYNKVVESREKQLPEHQIKEIEFLKAQCKHDHMQLSLMSCQTLVRLVDEGVLE 75
            :||:|....|.||         || ..:|...:..|..:|..:::.:....|:.||.||::...:
 Frog    43 ASVLKENVSLGKI---------KQ-SSNQTPALNILWEKCCSNNVVVRTACCEALVLLVEQDHAD 97

  Fly    76 ANGVQNSLLSMLANAGPMHFAIITESILGM-----QLLSLKRRTSSLKGQESYQCTYGLKTQQHP 135
            .:.|.|.:|:::.:||         ::.|:     :||..:.|.:...|:......|.:....||
 Frog    98 FDYVLNGILNLIPSAG---------TVQGLLKCVWRLLYTQARNAEKDGEHKDLGIYKIWNPPHP 153

  Fly   136 LISLLQHSSANMHDVANKIIGICQHYDKSIRDYSIEYLRPVFLYVLCNPQTLHDVKP----IWTC 196
            .||:|::.......:..:|..:.|...:|....::.::.....|:.|.|..|.:...    :...
 Frog   154 FISILENRPDCWPALLQQISTLPQLCHESCPSSNVYFMASFLRYLYCEPSQLQEYSALRIGLRKA 218

  Fly   197 LLNLSGK-------QPEARAL--MQELLAWSKFNNANTCLCTSILVIEAIDHFLQREDHAQSIDL 252
            |:.:|||       :||...|  ..:::.:.:|       ..|..|.||.   |..:|..:|:.|
 Frog   219 LVMVSGKSGSNNPSKPEEHILRIFIDMMGYIQF-------LDSTQVTEAT---LYIKDLCRSLHL 273

  Fly   253 ------GIYQACLIKQLANYGIDPRPSLQC--LLRVLHATREQTKDHYHVLLVLLA-DVLHVLSP 308
                  ....|..::.|.......:.:..|  |:.:|....:...:.:....||:. .:|.:.||
 Frog   274 HPDFWRNELSAVCLQALCACEASLKIAGDCSTLIEILEQNSDLLGESFPTEQVLIGLSLLLLQSP 338

  Fly   309 FYLADLLRIIVFVVVQERCGHEY--ILNMCLDGIIQWMSQTAF---IPAEGLALAHQIVEKVLDP 368
            .....|:..:|..::..|..:.:  |:.:.:..::|.:|.:|.   ...:|.:...|:...:|: 
 Frog   339 ASQQKLILKLVMKILSFRGENNFPSIVQVLIMPLLQILSTSALGYCFSDDGGSSREQLATSLLE- 402

  Fly   369 ERSDQEAEVISTKQLK----PAHMRNYHPDIAIAFDLATLVESFDASDNQDVFAFVDALNVKANT 429
              ..|.|:....::|.    |..:..:|..:|...::....:. |.|..:|..:.:.:: :..||
 Frog   403 --MVQNADCSGERRLNDVSLPLPVTTWHCSMAATLNILNKFQD-DHSAARDWLSSISSM-LAPNT 463

  Fly   430 VFCQRLHLFLRALFLSKKPPVDCWFK-IYEVILQIVKVNEGIAYDFLMTYIFKLAHENNPELQLE 493
            .....:.|.|..|.:.:.   |...: :.:||..:.|.:.......:...:.:|.|...||...:
 Frog   464 QVPVNVSLLLSFLLIRES---DYGLRNVLKVITDVSKADSSQVPYLVPVLMLRLGHSLAPESSRD 525

  Fly   494 LLRGLASFAVCKDNVPMILNTIRNLSTEN--GTFCVDLYVRLWRVERRTYPFLLKQIA----QPL 552
            :|..|.:....|..|..||...:.|.:.:  ....:.|...||..:.|.||.|.|.:|    |.|
 Frog   526 ILYTLPTLGTHKVCVAQILRVFQMLGSTSKLQPIALRLMTSLWEKQDRIYPELQKMMALCDTQSL 590

  Fly   553 -PDNDKRWELQIARNHAMREICQEKPTLHGTELLPHLSNTLNHSSDEAGDLAT--SLALDAIYSL 614
             ...|..||..:|:...:|:||:::|..||.::|..::..| |...:| |.||  :|||..:::|
 Frog   591 ATGKDTLWEKMLAKAATVRDICRQRPYQHGADMLAAITQVL-HECTKA-DQATPAALALQGLHAL 653

  Fly   615 CDSHTVNIASTWQALGSKFRNEMRPQTLKSLYRLFGLVPMLKTPTLEYEKLADDALEHLWQAISR 679
            |.:..|:|.|.|.||.||...|.||..||.|:.||.|||.|...|.||:|...:.:..||:  ..
 Frog   654 CQAEVVDIRSAWNALSSKLSCETRPLVLKVLHELFALVPSLTVDTEEYQKFKTEIIGILWR--HT 716

  Fly   680 PGTDAAQVRNALVALRNYEPGVTLNLRHIPAQFRFEIVGGGVGAGGAGGREVVDLQQE------- 737
            ...|...:.:|..:|..:|.. ..::.|||.|.|.|:          ..::..||..|       
 Frog   717 QSKDLNVMVSAYKSLCEFEAD-EHSILHIPEQARPEV----------APKDESDLASEEEEKETD 770

  Fly   738 -TVPGEVWVQLLQKIRPECGDAAADLISHHIDSEINAFRSGVY---------RLPEGKP------ 786
             ::||..:::|:.........|....:|..:..|::....|:|         |..:||.      
 Frog   771 ISIPGSSYIKLMALTPVSVLPALEAFLSSLVKQEMSRMPRGIYHTALRGGNIRSDQGKTIAGVPN 835

  Fly   787 ------EPRKLVGL---FATSPL-------------RAVTNYLVSQARFGDY------------- 816
                  |..|..||   .|...|             |.:..:|.|:.|  .|             
 Frog   836 FMLKMYEKNKQPGLKPGLAAGMLLCYDLPIQTDKDGRPINRFLASRGR--SYQQMLTALINEVNI 898

  Fly   817 ----------VPEPY----------------------------------------------AVTF 825
                      :|:.:                                              |:|.
 Frog   899 QSSEWHRSILLPQSWLGFMTRTYHAVLQGRQAELEMQLKHGKDDPQELQYKTFTAWLWVRDALTD 963

  Fly   826 ALRSLSKNFP----------------------------------KP--IPPLDWSCLTS------ 848
            .:|...|:.|                                  :|  :|...|..:..      
 Frog   964 VIRCAVKDSPVVKGNSLLALTGLAVAVSKYESSLPSETEGAPEIEPDILPTSAWITMVLDTLLST 1028

  Fly   849 --------------FFHLSFDARKYCIIIAKNQAVNSGTAKRLLENFLIDFEPNCFEEDLLLLFS 899
                          |.|.|:.......:||::.|   .||..||...|:.......|:.|.:|.:
 Frog  1029 VDNHYQPKGRIFPWFQHKSYSGENTASVIARSCA---ATALSLLVPVLVVSNKEKVEDILNILTA 1090

  Fly   900 LLP-------------EIANSVSLQILKNFAEKVAVYCFKESQIN-------DFVEGCLFEKFLE 944
            .||             .:..:|.:.|.:.|.|||:....:  |:|       |.:|.|.|::.||
 Frog  1091 RLPGKPLADDSQSLQIHMGLAVGMFISRLFEEKVSDVSGR--QMNLLMMRSLDALESCCFDQSLE 1153

  Fly   945 -------SVKYIFTGNCDIPEV---LDVFTLIVERYMDSMNLDSRLFER----YTEVVATL---- 991
                   .|..:.:..|...:.   :.|.|.:.:.|| :::.|....|:    |:....|:    
 Frog  1154 YNMGCILGVGLVLSFMCQSSQTDSQVHVSTTLRKFYM-ALSEDKSRTEQEGLSYSLACGTVSAFS 1217

  Fly   992 -----------HPNAIDGLTTPANWWETPVGKLKKATIIRCYLV--------LYNEKLPNPLKWL 1037
                       |.|.: .|.|..| .:||...|...:|:....:        |.|..||   .|:
 Frog  1218 AGILSAEEAEEHMNKL-RLMTEQN-QQTPGLALALGSIVHGLSICGHGKAEDLNNRLLP---AWM 1277

  Fly  1038 TPIIDAYEKRAEERPFFYRHLAAT--LYAFESDE-----------HSSNWIAEMFLEIQMLLAEA 1089
            ..::      ||..|...| |||.  |.|....|           |||.:              .
 Frog  1278 KILL------AEGCPTMQR-LAAINGLVALVGSESALIQLKSEVIHSSQF--------------Q 1321

  Fly  1090 SNKEKVNRALYLLDIFILAVDVLSGCAVLLGSVDVVATDDKQRLALFPESLQYL 1143
            |...:|.||:..:..|..|:.:.:..|.:||.:.:.:....|.....|....||
 Frog  1322 SKLNEVIRAITQIVSFSGAIGLQTNAAWILGHLHLSSISSSQSRTSIPPDFSYL 1375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3520NP_611792.1 DUF3730 475..694 CDD:289307 72/227 (32%)
DUF3028 <798..1201 CDD:288127 95/554 (17%)
focadNP_001361602.1 DUF3730 507..731 CDD:372168 72/227 (32%)
Focadhesin 1230..1812 CDD:371426 39/172 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 106 1.000 Domainoid score I6537
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 196 1.000 Inparanoid score I3708
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D104158at33208
OrthoFinder 1 1.000 - - FOG0007517
OrthoInspector 1 1.000 - - oto103511
Panther 1 1.100 - - LDO PTHR16212
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.070

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