DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3520 and Focad

DIOPT Version :9

Sequence 1:NP_611792.1 Gene:CG3520 / 37708 FlyBaseID:FBgn0034859 Length:1204 Species:Drosophila melanogaster
Sequence 2:XP_036019889.1 Gene:Focad / 230393 MGIID:2676921 Length:1836 Species:Mus musculus


Alignment Length:1322 Identity:279/1322 - (21%)
Similarity:490/1322 - (37%) Gaps:278/1322 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 HSSV--VKLASCLEKIY---NKVVESR------EKQLPEHQIKE-----------IEFLKAQCKH 52
            |..|  .|::..::|.:   |.:::|:      ...|.||.:.|           :..|..:|..
Mouse    31 HKPVREAKMSDDIKKRFDFPNSLIQSQAVGHLIAAVLKEHGVSEKIHQSTNQTAALNLLWEKCCS 95

  Fly    53 DHMQLSLMSCQTLVRLVDEGVLEANGVQNSLLSMLANAGPMHFAIITESILGMQLLSLKRRTSSL 117
            ||:.:.....:.||.||.:|..|.:.|.|.:|::..:|..|...|  :::  |:||.::......
Mouse    96 DHVVVRTACSEGLVALVAQGHAEFSYVLNGILNLTPSARNMSGLI--KAL--MKLLQMQALREGQ 156

  Fly   118 KGQESYQCTYGLKTQQHPLISLLQHSSANMHDVANKIIGICQHYDKSIRDYSIEYLRPVFLYVLC 182
            .|::..|..|.::....|||::|:|.......:..::....|...:......::.:.|...|:.|
Mouse   157 SGEKDIQDIYSIRNPPQPLITVLEHRPDCWPLLLQQLTAFFQQCPERSEASCVQIMAPFLWYLYC 221

  Fly   183 NPQTLHDVKPIWTCLLNL----SGKQPEARALMQELLAWSKFNNANTCLCTSILVIEAIDHFLQR 243
            .|..|.:...:...||.:    .|...||:..::|        .:...||.|:|..      ||.
Mouse   222 EPSQLEEYAKLRLSLLKVLLQPRGVCEEAQLSVRE--------QSTLQLCCSMLPC------LQM 272

  Fly   244 EDHAQSIDLGIY-QACLIKQLANYGIDPRPSLQCLLRVLHATREQTK--DHYHVLLVLLADVLHV 305
            :|..|:.::.:: :...:..|.:.|.......|..|::|.......|  .....|:.||...:.:
Mouse   273 KDLMQTTEMMLFVEEVYLSLLRHPGFWKSQLTQLTLQLLCICEVSLKITGECSSLIHLLERSVEL 337

  Fly   306 LSPFYLADLLRI-IVFVVVQERCGHEY-ILNMCL------DG-------------IIQWMSQTAF 349
            |...:..:|:.| |..:::|.....:. :||:.|      :|             ::|.:|.||.
Mouse   338 LGEDFPVELVIIGIALLLLQMPASQQKPLLNLALKLLSLTEGQKIPKASLLLLVPLLQILSSTAL 402

  Fly   350 -----IPAEGLA---LAHQIVEKVLDPERSDQEAEVISTKQLKPAHMRNYHPDIAIAFDLATLVE 406
                 :..||.:   ||..:|| ||..||...::..||.:...|  :.:.:..|..|:.:..::.
Mouse   403 EDCLAMGEEGPSRQQLALSLVE-VLQKERHGDDSHTISCRLAFP--VSSMYGSIFTAWRILDVIG 464

  Fly   407 SFDASDNQDVFAFVDALNVKANTVFCQRLHLFLRALFLSKKPPVDCWFKIYEVILQIVKVNEGIA 471
              :.|...|..|.|::| :.|.||...  |:||...:|..:.......:|..|..|:.:.:....
Mouse   465 --EESATSDWLATVESL-LSATTVIPP--HVFLLLAYLLVEDVGQNLQQILRVTTQLAQADSSQV 524

  Fly   472 YDFLMTYIFKLAHENNPELQLELLRGLASFAVCKDNVPMILNTIRNLSTENGTFCVD--LYVRLW 534
            .:.:...:|||....:|.....:|..|.:..|.|..|..||..|:.|.|......|.  |...||
Mouse   525 PNLIPVLMFKLGRPLDPVSYNHILYTLPTLGVHKVCVGQILRVIQLLGTTPRLRAVTLRLLTSLW 589

  Fly   535 RVERRTYPFLLKQIA-QPLPD----NDKRWELQIARNHAMREICQEKPTLHGTELLPHLSNTLNH 594
            ..:.|.||.|.:.:| ...|.    .:.:||..||:..::|:||:::|..||.::|..:|..||.
Mouse   590 EKQDRVYPELQRFMAVSDAPSLSVGKELQWEKLIAKAASIRDICKQRPYQHGADMLAAISQVLNE 654

  Fly   595 SSDEAGDLATSLALDAIYSLCDSHTVNIASTWQALGSKFRNEMRPQTLKSLYRLFGLVPMLKTPT 659
            .:........:|.|..:::||.:..|.|.|||.||..|...:|||..||:|..||.|||.|...|
Mouse   655 CTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDMRPLILKTLSELFSLVPSLTVNT 719

  Fly   660 LEYEKLADDALEHLWQAISRPGTDAAQVRNALVALRNYEPGVTLNLRHIPAQFRFEI-VGGGVGA 723
            :|||......|..||..........|..  |..:|.::..| ...:.|:|.:.|.|: |.|.:..
Mouse   720 VEYENFKVQVLSFLWTHTQNKNPTVASA--AYKSLSHFSAG-EHTILHLPEKIRPEMPVPGELDE 781

  Fly   724 GGAGGREVVDLQQETVPGEVWVQLLQKIRPECGDAAADLISHHIDSEINAFRSGVY--------R 780
                 .|.|||   ::||..:::||....|....|..:..:..:..|:.....|:|        |
Mouse   782 -----EESVDL---SIPGACFLRLLTITAPSVLPALEEFFTSLVRQEMVNMPRGIYHSALKGGVR 838

  Fly   781 LPEGKPEPRKLVGLFATSPLRAVTNYLVSQARFGDYVPEPYAVTFALRSLSKN-FPKPIPPLDWS 844
            ..:||             .:..:.|                   |.|::...| .|...|.|...
Mouse   839 SDQGK-------------TVAGIPN-------------------FILKTYETNKQPGLKPGLAGG 871

  Fly   845 CLTSFFHLSFDARKYCIIIAKNQAVNSGTAKRLLENFLIDFEPNCFEEDLLLLFS---------- 899
            .|            :|..:|..|:.:.....||:.:     ....|::..|.|..          
Mouse   872 ML------------FCYDLAMYQSKDGKPLNRLMAS-----RGRSFKQTTLALIHEVHVQLSEWH 919

  Fly   900 ---LLPE-----------------IAN-SVSLQILKNFAEKVAVYCFKESQINDFVEGCLFEKFL 943
               .||:                 ||. .:.||..|...|:|.   :|.|....:|...|.::..
Mouse   920 RAIFLPQAWLAYMTRAYHAILQGRIAELELQLQHGKEGPEEVQ---YKRSTAWLWVRDMLTDEIT 981

  Fly   944 ESVKYIFTGNCDIPEV-------LDVFTLIVERYMDSMNLDSRLFERYTEVVATLHPNAIDGLTT 1001
            :      |...:.|.|       |....::|.::..|:..||       :.|..:.||.:     
Mouse   982 K------TAAKESPVVKANALLALSSLAVVVSKHEASLCSDS-------DGVLEIQPNFL----- 1028

  Fly  1002 PANWWET---------------PVGKLKKATIIRCY------LVLYNEKLPNPLKWLTPI-IDAY 1044
            |...|.:               |.|:|......:.|      ..:........|..|.|: |.:.
Mouse  1029 PVKEWVSMVLNTLLVIVDSHYHPSGQLFTCFYHKSYSGENTASAIARSAAATALSLLVPVFIISC 1093

  Fly  1045 EKRAEERPFFYRHLAATLYAFESDEHSSNWIAEMFLEIQMLLAEASNKEKVNRALYLLDIFIL-A 1108
            :::.||   ....|.|.|....|.:.|......|.|.:.|.|:....::..:.:...:::.:: :
Mouse  1094 KEKVEE---ILNMLTARLPGKPSADESQAVQIHMGLALGMFLSRLCEEKLSDMSGQQMNLLLMKS 1155

  Fly  1109 VDVLSGCAVLLGSVDVVATDDKQRLALFPESLQY-------------LCDHVFWKDQEAKIYEFL 1160
            :|.|..|.                   |..||:|             |..|....:....:...|
Mouse  1156 LDALESCC-------------------FDPSLEYNTGCILGVGLALSLMSHSSHTESRVHVAASL 1201

  Fly  1161 FNLYKHTTMPASYADVFREAII 1182
            ..|..:.....|.:..|:|.::
Mouse  1202 RKLSTYLDESGSQSRTFQEVLV 1223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3520NP_611792.1 DUF3730 475..694 CDD:289307 71/225 (32%)
DUF3028 <798..1201 CDD:288127 75/460 (16%)
FocadXP_036019889.1 DUF3730 528..752 CDD:403652 71/225 (32%)
Focadhesin 1248..1836 CDD:402696
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838090
Domainoid 1 1.000 104 1.000 Domainoid score I6715
eggNOG 1 0.900 - - E1_2C769
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 200 1.000 Inparanoid score I3775
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D104158at33208
OrthoFinder 1 1.000 - - FOG0007517
OrthoInspector 1 1.000 - - oto93264
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR16212
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8028
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.890

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