DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3530 and Mtmr2

DIOPT Version :9

Sequence 1:NP_726322.1 Gene:CG3530 / 37707 FlyBaseID:FBgn0028497 Length:761 Species:Drosophila melanogaster
Sequence 2:XP_036011299.1 Gene:Mtmr2 / 77116 MGIID:1924366 Length:718 Species:Mus musculus


Alignment Length:644 Identity:229/644 - (35%)
Similarity:352/644 - (54%) Gaps:82/644 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TSALRLSFDNISPETEEPPDGNKRLWGVPVPPFVSEKVVSWIEEEFNEAPVFYNGNSVLKKVENV 84
            :.::..|.||.||:.....:.||          ::|.          |.|....|.::....::|
Mouse   115 SDSISTSADNFSPDLRVLREANK----------LAEM----------EEPALLPGENIKDMAKDV 159

  Fly    85 RMIDRYNTKNPTVGTLYLTATHLIF--VEPDSNKETWILHMH---VASIEKL-PLSTTGS---PL 140
            ..|..:.  ....|||.:|:..|.|  :|.|   ..::|...   ::.:||: ..|:.|.   .|
Mouse   160 TYICPFT--GAVRGTLTVTSYRLYFKSMERD---PPFVLDASLGVISRVEKIGGASSRGENSYGL 219

  Fly   141 LIRCKTFLSVTFV-IPKDSECHDVYTSLLKLFQPVSIN-KLYCFNYQPNKDDFPKNAGWDYFKLE 203
            ...||...::.|. .|:......::.:|:|...|||.. .|:.|.|   |:.||:| ||..:...
Mouse   220 ETVCKDIRNLRFAHKPEGRTRRSIFENLMKYAFPVSNGLPLFAFEY---KEVFPEN-GWKLYDPL 280

  Fly   204 AEFKHMLVPNEAWTLCSMNEKYELCDTYPRQIYVPKEATTLMLISSSRFRSKGRLPVLTYLH-NN 267
            .|::...:|||:|.:..:||:||||||||..:.||.......|...:.|||:||:|||:::| .:
Mouse   281 LEYRRQGIPNESWRITKINERYELCDTYPALLVVPANIPDEELKRVASFRSRGRIPVLSWIHPES 345

  Fly   268 KASICRCSQPLSGFSA-RCLEDEQMLEAIRKTNSNTDYMYVVDTRPRINAMANRAAGKGYENEAF 331
            :|::.|||||:.|.|. |..|||:.|:||..:|:.:..:::.|.||.:||:||:|.|.|||:|..
Mouse   346 QATVTRCSQPMVGVSGKRSKEDEKYLQAIMDSNAQSHKIFIFDARPSVNAVANKAKGGGYESEDA 410

  Fly   332 YENIKFHFLGIENIHVQRASLQKVLEACEQKSPTM--SAFINALESSGWLKHIRSILDTSSFIAN 394
            |:|.:..||.|.||||.|.||:|:.|..   .||:  :.:::.|||:.||:||:.||..:..||:
Mouse   411 YQNAELVFLDIHNIHVMRESLRKLKEIV---YPTIEETHWLSNLESTHWLEHIKLILAGALRIAD 472

  Fly   395 AVDKG-VSVVVHCSDGWDRTAQVCSLAQLMLNPYYRTIKGFQALIEKDWLAFGHKFSERCGH--- 455
            .|:.| .|||||||||||||||:.|||.|||:.|||||:||:.|:||:||:|||:|..|.||   
Mouse   473 KVESGKTSVVVHCSDGWDRTAQLTSLAMLMLDGYYRTIRGFEVLVEKEWLSFGHRFQLRVGHGDK 537

  Fly   456 IQTDAREVSPIFTQFLDCTWQ-------LMSQRSEAFEFNERFLLILHDHVHSCQFGTFVGNCEK 513
            ...|| :.||:|.||:||.||       |..|...||||||.||:.:.||::||.||||:.|.|:
Mouse   538 NHADA-DRSPVFLQFIDCVWQMTRQFVVLNLQFPTAFEFNEYFLITILDHLYSCLFGTFLCNSEQ 601

  Fly   514 DRLDLKLAERTFSLWGYMANHLNEYINPLYKPNVDEAIKANLAPQCIKFWRGMYSRFESGIHPRE 578
            .|....|.::|.|||.|:.:.|.::.||||....:..:....:.:.::.|.|.|.|:...:.|:|
Mouse   602 QRGKENLPKKTVSLWSYINSQLEDFTNPLYGSYSNHVLYPVASMRHLELWVGYYIRWNPRMKPQE 666

  Fly   579 PLGDVLLDSKEHCNSLEDHVQHLTKRIASFKNYISKSAKKLQDATSAPGKVNKELSSNE 637
            |:                |.::  |.:.:.:..:.:..::||...|     |:..||:|
Mouse   667 PI----------------HSRY--KELLAKRAELQRKVEELQREIS-----NRSTSSSE 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3530NP_726322.1 PH-GRAM_MTMR6-like 78..173 CDD:270030 22/104 (21%)
Myotub-related 179..514 CDD:284109 165/349 (47%)
FYVE_MTMR_unchar 693..753 CDD:277277
Mtmr2XP_036011299.1 PH-like 141..255 CDD:418428 26/128 (20%)
Myotub-related 270..603 CDD:399535 160/337 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846031
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824298at2759
OrthoFinder 1 1.000 - - FOG0000303
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1956
SonicParanoid 1 1.000 - - X213
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.880

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