DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtmr6 and Sbf2

DIOPT Version :10

Sequence 1:NP_726322.1 Gene:Mtmr6 / 37707 FlyBaseID:FBgn0028497 Length:761 Species:Drosophila melanogaster
Sequence 2:XP_008758019.1 Gene:Sbf2 / 691042 RGDID:1588657 Length:1904 Species:Rattus norvegicus


Alignment Length:819 Identity:189/819 - (23%)
Similarity:297/819 - (36%) Gaps:274/819 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 TVGTLYL----TATHLIFVEPDSNKETWILH--MHVASIEKLPLSTTGSPLLIRCKTFLSVTFVI 154
            |:|..||    |.|   .||..:|:..|...  :.|:...:||.|||                  
  Rat  1052 TIGRQYLLKKRTGT---IVEERANRPGWNEEDDISVSDDCELPTSTT------------------ 1095

  Fly   155 PKDSECHDVYTSLLKLFQPVSINKLY---CF-NYQ---------PNKDDFPKNAGWDYFKLEAEF 206
                         ||..:..::.:|.   || :||         .:....|     :||::.|. 
  Rat  1096 -------------LKASEKSTMEQLVEKACFRDYQRLGLGTISGSSSRSKP-----EYFRVTAS- 1141

  Fly   207 KHMLVPNEAWTLCSMNEKYELCDTYPRQIYVPKEATTLMLISSSRFRSKGRLPVLTYLHNNKASI 271
                           |..|.||.:||..:.:|:......|...:|.....||||:.:.::...::
  Rat  1142 ---------------NRLYSLCRSYPGLLVIPQAVQDSSLPRVARCYRHNRLPVVCWKNSRSGTL 1191

  Fly   272 CRCSQPLSGF------------------------SARCLEDEQMLEAI----------------- 295
            ...|   .||                        |:..:|.|:.|:|:                 
  Rat  1192 LLRS---GGFHGKGVVGLFKSQNSPQAVSTSSLESSSSIEQEKYLQALLTAVIVHQKLRGNSTLT 1253

  Fly   296 -------------RKTNSNTDYMYVV----DTRPRINAMAN------------------------ 319
                         |.:..:|....||    |..|. |:.|.                        
  Rat  1254 VRPTLALSPGTERRSSRMSTVLKQVVPGHLDVNPS-NSFARGVHGYRDKCFTQSNSKSSAKEPVH 1317

  Fly   320 --------------------------RAAGK----GYENEAFYEN-------------------- 334
                                      |.|||    .:.|..:.:|                    
  Rat  1318 NQGVWASLRSSTRLISSPTSLIDVGARLAGKDHSASFSNSTYLQNQLSKRQAALYIFGEKSQLRS 1382

  Fly   335 --IKF----HFLGIE--NIHVQRASLQKVLEACEQKS-PTMS--AFINALESSGWLKHIRSILDT 388
              ::|    .|:.:|  .|...:||.:|::.||...: ||.|  .|:.|||.|.|...:..|:..
  Rat  1383 SKVEFAFNCEFVPVEFHEIRQVKASFKKLMRACIPSTIPTDSEVTFLKALEDSEWFPQLHRIMQL 1447

  Fly   389 SSFIANAVDKGVSVVVHCSDGWDRTAQVCSLAQLMLNPYYRTIKGFQALIEKDWLAFGHKFSERC 453
            :..::..::.|.||.|...:|||.|.||.||.||:.:|:||||:||:.|:||:||:||||||:|.
  Rat  1448 AVVVSEVLENGSSVWVCLEEGWDITTQVTSLVQLLSDPFYRTIEGFRMLVEKEWLSFGHKFSQRS 1512

  Fly   454 G-HIQTDAREVSPIFTQFLDCTWQLMSQRSEAFEFNERFLLILHDHVHSCQFGTFVGNCEKDRLD 517
            . .:.:.....:|||.|||||..|:.:|....||||..:|..|..|..|.:|.||:.:.:.:||:
  Rat  1513 SLALNSQGSGFAPIFLQFLDCVHQVHNQYPTEFEFNLYYLKFLAFHYVSNRFKTFLLDSDYERLE 1577

  Fly   518 L---------KLAERTFSLW---GYMANHLNEYINPLYKPNVDEAIKANLAPQCIKFWRGMYSR- 569
            .         |.|::...:|   ..|......:.|.||.|...||:|.|:....:|.| ..|:. 
  Rat  1578 HGTLFDDKGDKHAKKGVCIWECIDKMHKRSPVFFNYLYSPVEIEALKPNVNVSSLKKW-DYYTEE 1641

  Fly   570 -FESGIHPREPLGDVLLDSKEHCNSLEDHVQ----HLTKRIASFKNYISKSAKKLQDAT-SAPGK 628
             ..:|     |..|.::.:.:|....|..|.    ..::|...:..|        .|.| |.|..
  Rat  1642 TLSAG-----PSYDWMMLTPKHFPYEESDVAGGAGPQSQRKTVWPCY--------DDVTCSQPDA 1693

  Fly   629 VNKELSSNEINDNKYN---------YDKKLSELSAAD-DDHPLKASNMS--FASLSLSAEQSSPP 681
            :.:..|..|..::|.|         ::|...:|.... .||.|:.|:.|  .||.::.:.|..|.
  Rat  1694 LTRLFSEIEKLEHKLNQTPEKWHQLWEKITMDLKEEPRTDHSLRHSSRSPGIASTNVPSYQKRPA 1758

  Fly   682 -QAL---PEEINSVAVDWKPMRNVTTCSCSTPFDQFSKK 716
             .||   |.|..|...  .|...|.. ..:|.:.|::.|
  Rat  1759 LHALHRSPTEDQSTTT--APSNGVEH-RAATLYSQYTSK 1794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mtmr6NP_726322.1 PH-GRAM_MTMR6-like 78..173 CDD:270030 18/82 (22%)
PTP-MTMR6-like 202..501 CDD:350380 105/442 (24%)
FYVE_MTMR_unchar 693..753 CDD:277277 5/24 (21%)
Sbf2XP_008758019.1 uDENN 1..86 CDD:214824
DENN 115..297 CDD:460461
dDENN 351..419 CDD:129037
SBF2 529..752 CDD:463536
PH-GRAM_MTMR13 880..998 CDD:275416
PTP_DSP_cys 1136..1540 CDD:475123 98/423 (23%)
PH_Sbf1_hMTMR5 1797..1902 CDD:269941
Blue background indicates that the domain is not in the aligned region.

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