DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3530 and mtmr9

DIOPT Version :9

Sequence 1:NP_726322.1 Gene:CG3530 / 37707 FlyBaseID:FBgn0028497 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_001038535.1 Gene:mtmr9 / 565063 ZFINID:ZDB-GENE-040724-223 Length:549 Species:Danio rerio


Alignment Length:525 Identity:186/525 - (35%)
Similarity:297/525 - (56%) Gaps:17/525 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 PTV-GTLYLTATHLIF-VEPDSNKETWILHMHVASIEKLPLSTTGSPLLIRCKTFLSVTFVIPKD 157
            ||| |||.||..|:|. ...|:.:|.|:||.::.||||..:.:.|: ::::||....:...||..
Zfish    23 PTVEGTLCLTGHHIILSSRQDNTEELWLLHANIDSIEKRFVGSLGT-IIVKCKDLRVIQLDIPGM 86

  Fly   158 SECHDVYTSLLKLFQPVSINKLYCFNYQPNKDDFPKNAGWDYFKLEAEFKHMLVPNEAWTLCSMN 222
            .||.::.:|:..|....|::.:|.|.|:|..:..  ..||..|..|..||.:....:.|.|..:|
Zfish    87 EECLNIASSVE
ALSTLDSVSLMYPFFYRPLFEVI--EDGWQLFVPEEAFKDLESMTDEWRLSEVN 149

  Fly   223 EKYELCDTYPRQIYVPKEATTLMLISSSRFRSKGRLPVLTYLH-NNKASICRCSQPLSGFSA-RC 285
            :.:.:|.:||..:.|||:.....||.::.||..||.|||:|.| .|...:.|.:|||:|.:. ||
Zfish   150 KDFSVCPSYPSLLTVPKDIDDESLIKAASFRHGGRFPVLSYYHKKNGMVMMRAAQPLTGTNGRRC 214

  Fly   286 LEDEQMLEAIRKTNSNTDYMYVVDTRPRINAMANRAAGKGYENEAFYENIKFHFLGIENIHVQRA 350
            .|||:::.|........   |::|||....|...:|.|.|:|.||.|...:.....||..::.:.
Zfish   215 KEDEKLINATLCAGKRG---YIIDTRTIAVAQQAKARGGGFEQEANYPQWRRIHKAIERSNILQE 276

  Fly   351 SLQKVLEACEQKSPTMSAFINALESSGWLKHIRSILDTSSFIANAVDK-GVSVVVHCSDGWDRTA 414
            ||.|::|||..:|..|..:::.||:|.|..|::.||.|:...|..:|: |.||:||.|:|.|.|.
Zfish   277 SLIKLVEACNDQSHNMDRWLSKLEASNWQSHVKEILTTACLAAQCIDREGASVLVHGSEGTDSTL 341

  Fly   415 QVCSLAQLMLNPYYRTIKGFQALIEKDWLAFGHKFSERC---GHIQTDAREVSPIFTQFLDCTWQ 476
            ||.||||::|:|..|||:||:||||::||..||.|.:||   .:.....|..:|:|..||||.||
Zfish   342 QVTSLAQIILDPACRTIRGFEALIEREWLQAGHPFQQRCAQSAYSNGKPRSEAPVFLLFLDCVWQ 406

  Fly   477 LMSQRSEAFEFNERFLLILHDHVHSCQFGTFVGNCEKDRLDLKLAERTFSLWGYM--ANHLNEYI 539
            ::.|...:|:|:|.||::|.:|.::.|||||:||...:|..|:|:.:|.|||.::  ...|..|:
Zfish   407 ILRQFPCSFQFSESFLIMLFEHTYASQFGTFLGNSVAERAKLQLSHKTVSLWSWVNRPQELERYL 471

  Fly   540 NPLYKPNVDEAIKANLAPQCIKFWRGMYSRFESGIHPREPLGDVLLDSKEHCNSLEDHVQHLTKR 604
            ||||:.| :..|..::|||.:..|.|::.|:.......:.....::...|:...|::.|..|.::
Zfish   472 NPLYEAN-NLVIWPSVAPQSLLLWEGVFLRWNRSTKCLDEAYQEMVHIIEYNKELQNKVNSLRRQ 535

  Fly   605 IASFK 609
            :|..:
Zfish   536 LAQLE 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3530NP_726322.1 PH-GRAM_MTMR6-like 78..173 CDD:270030 28/79 (35%)
Myotub-related 179..514 CDD:284109 131/340 (39%)
FYVE_MTMR_unchar 693..753 CDD:277277
mtmr9NP_001038535.1 PH-GRAM_MTMR9 1..97 CDD:275398 27/74 (36%)
Myotub-related 108..444 CDD:284109 131/340 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590749
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192248at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.850

Return to query results.
Submit another query.