DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3530 and MTMR8

DIOPT Version :9

Sequence 1:NP_726322.1 Gene:CG3530 / 37707 FlyBaseID:FBgn0028497 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_060147.2 Gene:MTMR8 / 55613 HGNCID:16825 Length:704 Species:Homo sapiens


Alignment Length:531 Identity:291/531 - (54%)
Similarity:381/531 - (71%) Gaps:5/531 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 KVENVRMIDRYNTKNPTVGTLYLTATHLIFVEPD--SNKETWILHMHVASIEKLPLSTTGSPLLI 142
            |||||:::|||.:|.|..|.|||||||||:||..  :.|||||...|:|::||||:::.|.||.:
Human     8 KVENVKLVDRYVSKKPANGILYLTATHLIYVEASGAARKETWIALHHIATVEKLPITSLGCPLTL 72

  Fly   143 RCKTFLSVTFVIPKDSECHDVYTSLLKLFQPVSINKLYCFNYQPNKDDFPKNAGWDYFKLEAEFK 207
            |||.|....||:..|..||:||.|||||.||.....||.|:|.|......:.:||......::|.
Human    73 RCKNFRVAHFVLDSDLVCHEVYISLLKLSQP
ALPEDLYAFSYNPKSSKEMRESGWKLIDPISDFG 137

  Fly   208 HMLVPNEAWTLCSMNEKYELCDTYPRQIYVPKEATTLMLISSSRFRSKGRLPVLTYLH-NNKASI 271
            .|.:||..||:...|..||:|.|||.:|.|||..|...::.||:||||.|:|||:||: .|.|:|
Human   138 RMGIPNRNWTITDANRNYEICSTYPPEIVVPKSVTLGTVVGSSKFRSKERVPVLSYLYKENNAAI 202

  Fly   272 CRCSQPLSGFSARCLEDEQMLEAIRKTNSNTDYMYVVDTRPRINAMANRAAGKGYENEAFYENIK 336
            ||||||||||..||::||.:||||.:||..:.:||||||||::|||||||||||||||..|.||:
Human   203 CRCSQPLSGFYTRCVDDELLLEAISQTNPGSQFMYVVDTRPKLNAMANRAAGKGYENEDNYANIR 267

  Fly   337 FHFLGIENIHVQRASLQKVLEACEQKSPTMSAFINALESSGWLKHIRSILDTSSFIANAVD-KGV 400
            |.|:|||||||.|:||||:||.||.|:||||.|::.|||||||:||::|:|...||..||. :..
Human   268 FRFMGIENIHVMRSSLQKLLEVCELKTPTMSEFLSGLESSGWLRHIKAIMDAGIFITKAVKVEKA 332

  Fly   401 SVVVHCSDGWDRTAQVCSLAQLMLNPYYRTIKGFQALIEKDWLAFGHKFSERCGHIQTDAREVSP 465
            ||:|||||||||||||||:|.::|:|:|||.||...||||:|::.|||||:||||:..|::||||
Human   333 SVLVHCSDGWDRTAQVCSVASILLDPFYRTFKGLMILIEKEWISMGHKFSQRCGHLDGDSKEVSP 397

  Fly   466 IFTQFLDCTWQLMSQRSEAFEFNERFLLILHDHVHSCQFGTFVGNCEKDRLDLKLAERTFSLWGY 530
            ||||||||.||||.|...||||||.|||.:||||.|||||.|:|||:|||.||::.|:|.|:|.:
Human   398 IFTQFLDCIWQLMEQFPCAFEFNENFLLEIHDHVFSCQFGNFLGNCQKDREDLRVYEKTHSVWPF 462

  Fly   531 MANHLNEYINPLYKP-NVDEAIKANLAPQCIKFWRGMYSRFESGIHPREPLGDVLLDSKEHCNSL 594
            :.....::.|||||. .:...:..:..|..|:||.|||:||:.|:.|::.:.:.||:.|:....|
Human   463 LVQRKPDFRNPLYKGFTMYGVLNPSTVPYNIQFWCGMYNRFDKGLQPKQSMLESLLEIKKQRAML 527

  Fly   595 EDHVQHLTKRI 605
            |..|..|.|::
Human   528 ETDVHELEKKL 538

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG3530NP_726322.1 PH-GRAM_MTMR6-like 78..173 CDD:270030 52/94 (55%)
Myotub-related 179..514 CDD:284109 204/336 (61%)
FYVE_MTMR_unchar 693..753 CDD:277277
MTMR8NP_060147.2 PH-GRAM_MTMR8 1..103 CDD:270153 52/94 (55%)
Myotub-related 109..446 CDD:284109 204/336 (61%)
Substrate binding. /evidence=ECO:0000269|PubMed:16959974 250..253 2/2 (100%)