DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3530 and zgc:154055

DIOPT Version :9

Sequence 1:NP_726322.1 Gene:CG3530 / 37707 FlyBaseID:FBgn0028497 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_001070610.1 Gene:zgc:154055 / 556036 ZFINID:ZDB-GENE-060929-612 Length:567 Species:Danio rerio


Alignment Length:564 Identity:184/564 - (32%)
Similarity:297/564 - (52%) Gaps:48/564 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 KVENVRMIDRYNTKNPTV-GTLYLTATHLIFVEPDSNKETW---ILHMHVASIEKLPLSTTGSP- 139
            |..||..:......:|.: |||.:|:.||:|.: ..::.:|   ||..::.:|||...:..|.| 
Zfish     9 KTANVEDVTLRRPFHPALRGTLCVTSHHLLFSD-RKDEASWQLLILLKNIDAIEKSVENLFGYPR 72

  Fly   140 --------LLIRCKTFLSVTFVIPKDSECHDVYTSLLKLFQPVSINKLYCFNYQPNKDDFPKNAG 196
                    :.|:||..|.:...||...||.::.:|:..|....|:.::|.|.|:|:  ....:..
Zfish    73 AVGQSSGTITIKCKDLLVLQLEIPGMEECLNIASSIE
ALSSLESVTEMYPFFYRPS--HLALHGP 135

  Fly   197 WDYFKLEAEFKHMLVPNEAWTLCSMNEKYELCDTYPRQIYVPKEATTLMLISSSRFRSKGRLPVL 261
            |.....|..:|......:.|.:.::|..|.:|.:||..:.||:|.....|:.|:|||...|.|||
Zfish   136 WGLSSTEQYYKQTERLWDKWRVSTVNSDYSVCPSYPSAVIVPREVDDDKLVRSARFRQGSRFPVL 200

  Fly   262 TYLHN-NKASICRCSQPLSGFS-ARCLEDEQMLEAIRKTNSNTDYMYVVDTRPRINAMANRAAGK 324
            :|.|: |:..|.|.||||:|.: .||.|||.:|:|:   ...::..|::|.|....|...|..|.
Zfish   201 SYCHHRNRMVIMRSSQPLTGANRKRCREDELVLQAV---IDGSEMGYIIDLRSAQQAQQARMTGG 262

  Fly   325 GYENEAFYENIKFHFLGIENIHVQRASLQKVLEACEQKSPTMSAFINALESSGWLKHIRSILDTS 389
            |:|:::.|.|.|......|...|.:.||.|::|||..:|.::..:::.||:|.||.|:.|.|.|:
Zfish   263 GFESKSSYNNWKRIHRHHERGKVLQESLIKLVEACGDQSHSVDRWLSKLENSKWLSHVHSALSTA 327

  Fly   390 SFIANAVDKGV-SVVVHCSDGWDRTAQVCSLAQLMLNPYYRTIKGFQALIEKDWLAFGHKFSERC 453
            ..:|..|::.. ||:||.|:|.|.|..|.|||||:|:|..|::.||..|:|:||:..||.|..||
Zfish   328 GLVAECVERDAHSVLVHGSEGTDNTLLVSSLAQLILDPASRSLSGFLCLLERDWIQAGHPFQLRC 392

  Fly   454 GH-IQTDAR--EVSPIFTQFLDCTWQLMSQRSEAFEFNERFLLILHDHVHSCQFGTFVGNCEKDR 515
            .| ..:.||  :..|.|...|||.||:..|...|.||:|..||.|...|::..:|||:.|.|::|
Zfish   393 VHSAYSHARLKQECPTFLLLLDCVWQVWRQFPLAMEFSEALLLRLAQDVYASDYGTFLCNSEQER 457

  Fly   516 LDLKLAERTFSLW-GYMANHLNE-YINPLYKPNVDEAIKANLAPQCIKFWRGMYSRF----ESGI 574
            ....:.|:|..|: ..:...::| |:||||:| .|.||..::.||.::.|.|::.|:    ::..
Zfish   458 YAAGVKEKTHCLFQALLKPDIDEQYLNPLYEP-TDLAIWPSVHPQSLQLWTGLFLRWTEYAQNME 521

  Fly   575 HPREPLGDVLLDSKE-------------HCNSL---EDHVQHLT 602
            ..||.:..::.:.||             ||::|   |:.:..||
Zfish   522 EAREEVWSIVKEHKERAGSDRTNNNTSTHCDTLTPFENLMDELT 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3530NP_726322.1 PH-GRAM_MTMR6-like 78..173 CDD:270030 29/105 (28%)
Myotub-related 179..514 CDD:284109 125/340 (37%)
FYVE_MTMR_unchar 693..753 CDD:277277
zgc:154055NP_001070610.1 PH-GRAM_MTMR9 1..109 CDD:275398 28/100 (28%)
Myotub-related 120..456 CDD:284109 125/340 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590750
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192248at33208
OrthoFinder 1 1.000 - - FOG0000303
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.850

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