DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3530 and mtm1

DIOPT Version :9

Sequence 1:NP_726322.1 Gene:CG3530 / 37707 FlyBaseID:FBgn0028497 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_001015828.1 Gene:mtm1 / 548545 XenbaseID:XB-GENE-1002030 Length:602 Species:Xenopus tropicalis


Alignment Length:593 Identity:221/593 - (37%)
Similarity:333/593 - (56%) Gaps:62/593 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 EEFNEAPVFYNGNSVLKKVENVRMIDRYNTKNPTVGTLYLTATHLIF----VEPDSNKETWILHM 123
            |:.:|.|.. .|.:::...:.:.|...|   .|..|.:::|...|.|    :||       ::..
 Frog    29 EQNDEIPCL-PGEALITDKDVIYMCPFY---GPVKGRIHVTNYKLYFKGEEMEP-------LISF 82

  Fly   124 HV-----ASIEKL-PLSTTGS---PLLIRCKTFLSVTFVIPKDSECH---DVYTSLLKLFQPVSI 176
            .|     |.|||: ..|:.|.   .|.|.||...::.|.:.:  |.|   .::..|.|...|:| 
 Frog    83 SVPLGVIARIEKMGGASSRGENSYGLDITCKDMRNLRFALKQ--EVHSRKQIFEDLTKYAFPLS- 144

  Fly   177 NKLYCFNYQPNKDDFPKNAGWDYFKLEAEFKHMLVPNEAWTLCSMNEKYELCDTYPRQIYVPKEA 241
            :.|..|.:| |::.||:| ||..:....||:...:||..|.:..:|:.||||||||..:.||..|
 Frog   145 HGLLLFAFQ-NEEKFPEN-GWAVYDAMTEFRRQGLPNGQWRITFINKNYELCDTYPPLLVVPYSA 207

  Fly   242 TTLMLISSSRFRSKGRLPVLTYLH-NNKASICRCSQPLSGFSA-RCLEDEQMLEAIRKTNSNTDY 304
            :...|...:.|||:.|:|||::|| .|:::|.||||||.|.|. |..:||:.|:.||.||..|..
 Frog   208 SEEDLKKVAAFRSRNRIPVLSWLHPENQSAIMRCSQPLVGMSGKRNKDDERYLDIIRDTNGQTSK 272

  Fly   305 MYVVDTRPRINAMANRAAGKGYENEAFYENIKFHFLGIENIHVQRASLQKVLEACEQKSPTMSAF 369
            :.:.|.||.:||:||:|.|.|||:|..|.|.:..||.|.||||.|.||:| |:.....:...|.:
 Frog   273 LTIYDARPNVNAVANKATGGGYESEDAYPNAELVFLDIHNIHVMRESLKK-LKDIVYPNVEESHW 336

  Fly   370 INALESSGWLKHIRSILDTSSFIANAVDKG-VSVVVHCSDGWDRTAQVCSLAQLMLNPYYRTIKG 433
            :::|||:.||:||:.:|..:..:|:.|..| .|||||||||||||||:.|||.|||:.|||||.|
 Frog   337 LSSLESTHWLEHIKLVLTGAIQVADKVASGKSSVVVHCSDGWDRTAQLTSLAMLMLDSYYRTIVG 401

  Fly   434 FQALIEKDWLAFGHKFSERCGH---IQTDAREVSPIFTQFLDCTWQLMSQRSEAFEFNERFLLIL 495
            |:.|::|:|::||||||.|.||   ...|| :.||||.||:||.||:..|...||||||.||:.:
 Frog   402 FEVLVQKEWISFGHKFSSRIGHGDKNHADA-DRSPIFLQFIDCVWQMSKQFPTAFEFNEHFLITV 465

  Fly   496 HDHVHSCQFGTFVGNCEKDRLDLKLAERTFSLWGYMANHLNEYINPLYKPNVDEAIKANLAPQCI 560
            .||::||:||||:.|||..|...|:.|:|.|||..:::..::|.||.|...::..:....:.:.:
 Frog   466 LDHLYSCRFGTFLYNCENIRDKEKVREKTQSLWSLISSEKSKYTNPFYTKELNRVLYPVASMRHL 530

  Fly   561 KFWRGMYSRFESGIHPREPLGDVLLDSKEHCNSLEDHVQHLTKRIASFKNYISK-------SAKK 618
            :.|...|.|:...|..::|            |.:|.....|   :|...:|:.:       ::.|
 Frog   531 ELWVNYYIRWNPRIRQQQP------------NPVEQRYMEL---LALRDDYVRRLEELQITNSPK 580

  Fly   619 LQDATSAP 626
            :..:|::|
 Frog   581 MNSSTTSP 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3530NP_726322.1 PH-GRAM_MTMR6-like 78..173 CDD:270030 25/110 (23%)
Myotub-related 179..514 CDD:284109 166/340 (49%)
FYVE_MTMR_unchar 693..753 CDD:277277
mtm1NP_001015828.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32 1/2 (50%)
PH-like 43..142 CDD:388408 25/110 (23%)
Myotub-related 150..485 CDD:368997 165/338 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 574..602 3/15 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824298at2759
OrthoFinder 1 1.000 - - FOG0000303
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1956
SonicParanoid 1 1.000 - - X213
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.950

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