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Protein Alignment CG3530 and mtmr8

DIOPT Version :9

Sequence 1:	NP_726322.1	Gene:	CG3530 / 37707	FlyBaseID:	FBgn0028497	Length:	761	Species:	Drosophila melanogaster
Sequence 2:	NP_956688.1	Gene:	mtmr8 / 393365	ZFINID:	ZDB-GENE-040426-1016	Length:	632	Species:	Danio rerio

Alignment Length:	640	Identity:	296/640 - (46%)
Similarity:	429/640 - (67%)	Gaps:	44/640 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly    77 VLKKVENVRMIDRYNTKNPTVGTLYLTATHLIFVEPDSN--KETWILHMHVASIEKLPLSTTGSP 139
            :..|||||::::||..|...:|||||||||||:||..||  ||.|:||.|:.|:|||.|:.:|.|
Zfish     5 ITPKVENVKLLNRYTEKKSALGTLYLTATHLIYVEQTSNTRKEAWVLHHHILSVEKLLLTASGCP 69

  Fly   140 LLIRCKTFLSVTFVIPKDSECHDVYTSLLKLFQPVSINKLYCFNYQPNKDDFPKNAGWDYFKLEA 204
            ||||||||..:..:..|:.:|.|||.|||:|.|||...:||.|.|.|::::..:..||:...:..
Zfish    70 LLIRCKTFQHLHLLFQKERDCQDVYQSLLRLSQPVKEEELYAFLYNPHQNEEERRRGWELISVVN 134

  Fly   205 EFKHMLVPNEAWTLCSMNEKYELCDTYPRQIYVPKEATTLMLISSSRFRSKGRLPVLTYLH-NNK 268
            :|..|.:.|:.|.:..:|:.:|:|.|||..:.:||.|:...:..|::|||:||||||:|.| :.|
Zfish   135 DFNRMGLSNDYWEISHINKNFEMCSTYPAILGLPKSASVATVTGSAKFRSRGRLPVLSYYHKDTK 199

  Fly   269 ASICRCSQPLSGFSARCLEDEQMLEAIRKTNSNTDYMYVVDTRPRINAMANRAAGKGYENEAFYE 333
            |:||||||||||.::||:||||||:||.:.|.|:.::|||||||::|||||||||||||||..|.
Zfish   200 AAICRCSQPLSGLNSRCVEDEQMLQAISQANPNSPFIYVVDTRPKLNAMANRAAGKGYENEDNYS 264

  Fly   334 NIKFHFLGIENIHVQRASLQKVLEACEQKSPTMSAFINALESSGWLKHIRSILDTSSFIANAV-D 397
            ||:|.|.|||||||.|:||||:||.|..|||:||.::..||:||||:||:|::|...|:|.|| :
Zfish   265 NIRFQFQGIENIHVMRSSLQKLLEVCSMKSPSMSDYLTGLENSGWLRHIKSVMDAGVFLAKAVCE 329

  Fly   398 KGVSVVVHCSDGWDRTAQVCSLAQLMLNPYYRTIKGFQALIEKDWLAFGHKFSERCGHIQTDARE 462
            :..||:|||||||||||||||||.|:|:||||||||...||||:|::||||||.||||:.:|.:|
Zfish   330 ERASVLVHCSDGWDRTAQVCSLACLLLDPYYRTIKGLMVLIEKEWISFGHKFSHRCGHLDSDPKE 394

  Fly   463 VSPIFTQFLDCTWQLMSQRSEAFEFNERFLLILHDHVHSCQFGTFVGNCEKDRLDLKLAERTFSL 527
            .||:|||||:|.|||..|....|||||.:|:.:||.|::||:|.|:|||:|:|||::|.|:||||
Zfish   395 ASPVFTQFLECVWQLSQQFPCVFEFNEHYLIEIHDQVYACQYGNFIGNCQKERLDMRLHEKTFSL 459

  Fly   528 WGYMANHLNEYINPLYKPNVDEAI-KANLAPQCIKFWRGMYSRFESGIHPREPLGDVLLDSKEHC 591
            |.::..:.::|.||||:.:::..: :.:..|...|||.|||:.::.|:||::.:.|.||...:..
Zfish   460 WPHLLENQHQYRNPLYRRSLESTVLRPSTLPLHFKFWCGMYNHYDRGMHPKQSVLDTLLTLTQRQ 524

  Fly   592 NSLEDHVQHLTKRIASFKNYI-------------SKSAKKL-------QDATSAP---GKVNKEL 633
            ...|..:..|.:::|.....:             :..::|:       .:.:.||   |.| ||:
Zfish   525 VEGERTMTELQRQLAVADGVLPDPAGPINTHGDQNNQSEKMPAPPVVQSNGSCAPLINGNV-KEV 588

  Fly   634 SSNEINDNKYNYDKKLSELSAADDDHPLKASNMSFASLSLSAEQSSPPQALPEEI 688
            .....|.|:.:.::      .|.::|.|.:.:   ..:|:..|.|.      ||:
Zfish   589 GPGAENSNQEDREE------PAANEHDLSSKD---KPVSVETEHSK------EEV 628

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.