DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3530 and Y48G1C.10

DIOPT Version :9

Sequence 1:NP_726322.1 Gene:CG3530 / 37707 FlyBaseID:FBgn0028497 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_001293165.1 Gene:Y48G1C.10 / 353378 WormBaseID:WBGene00021683 Length:803 Species:Caenorhabditis elegans


Alignment Length:540 Identity:124/540 - (22%)
Similarity:200/540 - (37%) Gaps:130/540 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 WTLCSMNEK---YELCDTYPRQIYVPKEATTLMLISSSRFRSKGRLPVLTYLHNNKASICRCSQP 277
            |.:.::|::   | ....||..:.|......:.:....:...:||.|:..:...|..|....|..
 Worm   216 WKIVALNKEGFNY-AAQGYPVYVVVSNFLDRVDIERQLQHYKQGRFPIWVWSRANGHSALFVSAD 279

  Fly   278 LSGFSARCLEDEQMLEAIRKTNSNTDYMYVVDTRPRINAMANRAAGKGYENEAFYENIKFHFLGI 342
            .....|......:|.|:|.:.:.|.:..:|:  :..::.::|  .||.::|              
 Worm   280 HENNIAMPAILAKMQESITRCHPNNEKPHVI--KLDVDFVSN--VGKAFDN-------------- 326

  Fly   343 ENIHVQRASLQKVLEAC-----EQKSPTMSAFINALESSGWLKHIRSILDTS-SFIANAVDKGVS 401
                        :|..|     ||.....:.:...|..:|||..::..|.|: ..|...||:..|
 Worm   327 ------------LLSLCAIDSYEQYVTLQNGWNTKLSRTGWLHLVKLCLQTTYQTIQWIVDRDRS 379

  Fly   402 VVVHCSDGWDRTAQVCSLAQLMLNPYYRTIKGFQALIEKDWLAFGHKFSERC-----------GH 455
            |::...:|.|.:..|.||.|:..:|:|||..|.|.||||.|:|.||.|.||.           |.
 Worm   380 VILQEDEGSDMSIIVASLTQMCCDPFYRTTTGLQQLIEKMWIALGHPFGERLLGRTDDDPSRRGK 444

  Fly   456 IQTDAR-EVSPIFTQFLDCTWQLMSQRSEAFEFNERFLLILHDHVHSCQFGTFVGNCEKDRLDLK 519
            .|...| :|.|.:..||||..||....:..|.|:...|:.|.|...:....:...|..:::|..|
 Worm   445 PQNKMRTDVMPTWLLFLDCVSQLHRIYTFEFTFSPHVLIALWDLSLTGMVPSMACNNLEEQLLAK 509

  Fly   520 LAERTFSLWGYMANHLNEYINPLYKPNV--DEAIKANLAPQCIKFWRGMYSRFE--SGIHPREPL 580
            :....|.|..|.....::....::...|  .|:||.| .|.|      .:|:|.  ..|.|....
 Worm   510 VGGGPFPLDRYFEKSYSKLFGNIWHDAVLFMESIKKN-QPVC------AHSKFLQCEFIRPPTSF 567

  Fly   581 GDVLLDSKEHCNSLEDHVQHLTKRIASFKNYISKSAKKLQDATSAPGKVNKELSSNEINDNKYNY 645
            .|:.|.|:.:...:..         |:.||               .||:.:|||          .
 Worm   568 CDIQLWSECYLRWIPP---------ANGKN---------------SGKLGEELS----------L 598

  Fly   646 DKKLSELSAADDDHPLKASNMSFASLSLSAEQSSP-PQALPE----------------------- 686
            |:|:.|::...:....|      ..|.|..|.||. |.::||                       
 Worm   599 DEKMIEMAKKWNSSEWK------MHLDLPEEYSSAYPYSIPEISRPIMDLNDFDMIRPDDFDAMS 657

  Fly   687 ---EINSVAVDWKPMRNVTT 703
               .|||.:....|:||.||
 Worm   658 MNSSINSYSFVNTPVRNNTT 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3530NP_726322.1 PH-GRAM_MTMR6-like 78..173 CDD:270030
Myotub-related 179..514 CDD:284109 77/318 (24%)
FYVE_MTMR_unchar 693..753 CDD:277277 5/11 (45%)
Y48G1C.10NP_001293165.1 PTP-MTMR10-like 258..466 CDD:350385 63/237 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1089
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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