DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtmr6 and mtm

DIOPT Version :10

Sequence 1:NP_726322.1 Gene:Mtmr6 / 37707 FlyBaseID:FBgn0028497 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_523489.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster


Alignment Length:560 Identity:211/560 - (37%)
Similarity:323/560 - (57%) Gaps:57/560 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 KNPTVGTLYLTATHLIFVE-PDSNKETWI-----LHMHVASIEKLPLSTTGSP----LLIRCKTF 147
            :.|..|.|.:|...|.|.. |..::|..:     |.: :|.:||:..:|:...    :.|.||..
  Fly    69 RGPVFGALTITNYRLYFRSLPLRDQEPPVVVDVPLGV-IARVEKIGGATSRGENSYGIEIFCKDM 132

  Fly   148 LSVTFVIPKDSEC-HDVYTSLLKLFQPVSIN-KLYCFNYQPNKDDFPKNAGWD---YFKLEAEFK 207
            .::.|...:.:.. ..|:..|.....|:|.: :|:.|.:.. .:....|.|||   .::..||.:
  Fly   133 RNLRFAHKQQNHSRRTVFEKLQANAFP
LSYSGRLFAFAHAA-ANSVNGNGGWDGWAVYEPLAELR 196

  Fly   208 HMLVPNEAWTLCSMNEKYELCDTYPRQIYVPKEATTLMLISSSRFRSKGRLPVLTYLH-NNKASI 271
            .:.|||:.|....:||.|.:||:||....|||.|:...|...::|||:.|||||:::: ..:|:|
  Fly   197 RLGVPNDMWRATKLNESYAICDSYPAVWAVPKAASDDFLRRVAQFRSRCRLPVLSWMNPRTQATI 261

  Fly   272 CRCSQPLSGFSA-RCLEDEQMLEAIRKTNSNTDYMYVVDTRPRINAMANRAAGKGYENEAFYENI 335
            .||||||.|.|. |..:||..|..|.:.|:.:|.:.::|.||..||:||:|.|.|||:|..|:|:
  Fly   262 TRCSQPLVGVSGKRNSDDEAYLSFIMEANAQSDKLTIMDARPSANAIANKAKGGGYESEDAYKNV 326

  Fly   336 KFHFLGIENIHVQRASLQKVLEACEQKSPTM--SAFINALESSGWLKHIRSILDTSSFIANAVD- 397
            :.:||.|.||||.|.||:||.|||   .||.  |.:..|::::.||||||.||..:..|.:.|: 
  Fly   327 EINFLDIHNIHVMRESLRKVKEAC---FPTTDDSKWQTAIDNTLWLKHIRCILAGAVRIVDKVET 388

  Fly   398 KGVSVVVHCSDGWDRTAQVCSLAQLMLNPYYRTIKGFQALIEKDWLAFGHKFSERCGH---IQTD 459
            ...|||||||||||||||:.:|:.|:|:|:|||::||:.||||:||:|||||.:|.||   ..:|
  Fly   389 MSTSVVVHCSDGWDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHKFQQRIGHGDNKHSD 453

  Fly   460 AREVSPIFTQFLDCTWQLMSQRSEAFEFNERFLLILHDHVHSCQFGTFVGNCEKDRLDLKLAERT 524
            | :.||:|.||:|..||:..|.:.||||||.||:.:.||::||:||||:.|.|.:|:...|..:|
  Fly   454 A-DRSPVFLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTFLCNTEAERVAEDLKHKT 517

  Fly   525 FSLWGYMANHLNEYINPLYKPNVDEAIKANLAP----QCIKFWRGMYSRFESGI--------HPR 577
            .|||.::.:.|::|:|||: |:.....:..|.|    :.::.|:|:|.|:..|:        ..|
  Fly   518 TSLWTHINSSLDQYLNPLF-PSFTHGAELVLRPIASVRSVRLWKGLYCRWNPGLCAPQHGCQRTR 581

  Fly   578 EPL----------GDVLLDSKEHCNSLEDHVQHLTKRIAS 607
            |.|          .::.|.|....||::     .|.|:||
  Fly   582 ELLSKQDQLFKLVNELRLKSNNRSNSMQ-----TTTRLAS 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mtmr6NP_726322.1 PH-GRAM_MTMR6-like 78..173 CDD:270030 19/90 (21%)
PTP-MTMR6-like 202..501 CDD:350380 146/306 (48%)
FYVE_MTMR_unchar 693..753 CDD:277277
mtmNP_523489.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 19/90 (21%)
Myotub-related 184..509 CDD:461958 155/328 (47%)
Blue background indicates that the domain is not in the aligned region.

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