DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3530 and Sbf2

DIOPT Version :9

Sequence 1:NP_726322.1 Gene:CG3530 / 37707 FlyBaseID:FBgn0028497 Length:761 Species:Drosophila melanogaster
Sequence 2:XP_006507990.1 Gene:Sbf2 / 319934 MGIID:1921831 Length:1904 Species:Mus musculus


Alignment Length:643 Identity:151/643 - (23%)
Similarity:232/643 - (36%) Gaps:234/643 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 TVGTLYL----TATHLIFVEPDSNKETWILH--MHVASIEKLPLSTTGSPLLIRCKTFLSVTFVI 154
            |:|..||    |.|   .||...|:..|...  :.|:...:||.|||                  
Mouse  1052 TIGRQYLLKKRTGT---IVEERVNRPGWNEEDDISVSDDSELPTSTT------------------ 1095

  Fly   155 PKDSECHDVYTSLLKLFQPVSINKLY---CF-NYQ---------PNKDDFPKNAGWDYFKLEAEF 206
                         ||..:..::.:|.   || :||         .:....|     :||::.|. 
Mouse  1096 -------------LKASEKSTMEQLVEKACFRDYQRLGLGTISGNSSRSKP-----EYFRVTAS- 1141

  Fly   207 KHMLVPNEAWTLCSMNEKYELCDTYPRQIYVPKEATTLMLISSSRFRSKGRLPVLTYLHNNKASI 271
                           |..|.||.:||..:.:|:......|...:|.....||||:.:.::...::
Mouse  1142 ---------------NRLYSLCRSYPGLLVIPQAVQDSSLPRVARCYRHNRLPVVCWKNSRSGTL 1191

  Fly   272 CRCSQPLSGF------------------------SARCLEDEQMLEAI----------------- 295
            ...|   .||                        |:..:|.|:.|:|:                 
Mouse  1192 LLRS---GGFHGKGVVGLFKSQNSPQAVSTSSLESSSSIEQEKYLQALLTAVIVHQKLRGSSTLT 1253

  Fly   296 -------------RKTNSNTDYMYVV----DTRPRINAMAN------------------------ 319
                         |.:..:|....||    |..|. |:.|.                        
Mouse  1254 VRPALALSPGTERRSSRMSTVLKQVVPGHLDVNPS-NSFARGVHGYRDKSFTQSNPKSSAKEPVH 1317

  Fly   320 --------------------------RAAGK----GYENEAFYEN-------------------- 334
                                      |.|||    .:.|..:.:|                    
Mouse  1318 NQGVWASLRSSTRLISSPTSFIDVGARLAGKDHSASFSNSTYLQNQLLKRQAALYIFGEKSQLRS 1382

  Fly   335 --IKF----HFLGIE--NIHVQRASLQKVLEACEQKS-PTMS--AFINALESSGWLKHIRSILDT 388
              ::|    .|:.:|  .|...:||.:|::.||...: ||.|  .|:.||..|.|...:..|:..
Mouse  1383 SKVEFAFNCEFVPVEFHEIRQVKASFKKLMRACIPSTIPTDSEVTFLKALGDSEWFPQLHRIMQL 1447

  Fly   389 SSFIANAVDKGVSVVVHCSDGWDRTAQVCSLAQLMLNPYYRTIKGFQALIEKDWLAFGHKFSERC 453
            :..::..::.|.||.|...:|||.|.||.|||||:.:|:||||.||:.|:||:||:||||||:|.
Mouse  1448 AVVVSEVLENGSSVWVCLEEGWDITTQVTSLAQLLSDPFYRTIAGFRTLVEKEWLSFGHKFSQRS 1512

  Fly   454 G-HIQTDAREVSPIFTQFLDCTWQLMSQRSEAFEFNERFLLILHDHVHSCQFGTFVGNCEKDRLD 517
            . .:.:.....:|||.|||||..|:.:|....||||..:|..|..|..|.:|.||:.:.:.:||:
Mouse  1513 SLALNSQGGGFAPIFLQFLDCVHQVHNQYPTEFEFNLYYLKFLAFHYVSNRFKTFLLDSDYERLE 1577

  Fly   518 L---------KLAERTFSLW---GYMANHLNEYINPLYKPNVDEAIKANLAPQCIKFW 563
            .         |.|::...:|   ..|......:.|.||.|...||:|.|:....:|.|
Mouse  1578 HGTLFDDKGDKHAKKGVCIWECIDKMHTRSPIFFNYLYSPVEVEALKPNVNVSSLKKW 1635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3530NP_726322.1 PH-GRAM_MTMR6-like 78..173 CDD:270030 18/82 (22%)
Myotub-related 179..514 CDD:284109 117/491 (24%)
FYVE_MTMR_unchar 693..753 CDD:277277
Sbf2XP_006507990.1 uDENN 1..87 CDD:214824
DENN 116..298 CDD:366936
dDENN 352..420 CDD:129037
SBF2 531..752 CDD:372054
PH-GRAM_MTMR13 880..998 CDD:275416
PTP_DSP_cys 1136..1540 CDD:391942 98/423 (23%)
PH_Sbf1_hMTMR5 1797..1902 CDD:269941
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846022
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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