DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mtmr6 and Mtmr1

DIOPT Version :10

Sequence 1:NP_726322.1 Gene:Mtmr6 / 37707 FlyBaseID:FBgn0028497 Length:761 Species:Drosophila melanogaster
Sequence 2:XP_063133525.1 Gene:Mtmr1 / 317296 RGDID:1306569 Length:689 Species:Rattus norvegicus


Alignment Length:659 Identity:228/659 - (34%)
Similarity:345/659 - (52%) Gaps:85/659 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IERQLSPTSALRLSFDNIS--------PETEE--------PP---------DGNKRLWGVPVPPF 52
            |..|:|.:    ::.:|:|        |:|.|        |.         ||||.         
  Rat    65 ISTQMSGS----VTSENVSRDYKVFRRPDTRELQEEHNGYPSAAEADQALRDGNKL--------- 116

  Fly    53 VSEKVVSWIEEEFNEAPVFYNGNSVLKKVENVRMIDRYNTKNPTVGTLYLTATHLIF--VEPDSN 115
                      .:..|||:| .|.|:...|::|..|..:  .....|||.:|...:.|  ||.|.:
  Rat   117 ----------AQMEEAPLF-PGESIKAIVKDVIYICPF--AGAVSGTLTVTDFKMFFKNVERDPH 168

  Fly   116 KETWILHMH---VASIEKLPLSTTGS---PLLIRCKTFLSVTFVIPKDSECH-DVYTSLLKLFQP 173
               :||.:.   ::.:||:...:.|.   .:.|.||...::.....::.:.. .::.:|.|...|
  Rat   169 ---FILDVPLGVISRVEKIGAQSHGDNSCGIEIVCKDMRNLRLAYKQEEQRKLGIFENLNKHAFP 230

  Fly   174 VSINK-LYCFNYQPNKDDFPKNAGWDYFKLEAEFKHMLVPNEAWTLCSMNEKYELCDTYPRQIYV 237
            :|..: |:.|||   |:.||.| ||..:...:|:|...:|||:|.:..:|..||.|||||..|.|
  Rat   231 LSNGQALFAFNY---KEKFPVN-GWKVYDPVSEYKRQGLPNESWKISKINSNYEFCDTYPAVIVV 291

  Fly   238 PKEATTLMLISSSRFRSKGRLPVLTYLH-NNKASICRCSQPLSG-FSARCLEDEQMLEAIRKTNS 300
            |.......|:..|.||:|||:|||:::| .::|:|.||.|||.| ...||.|||:.|:.|...|:
  Rat   292 PTSVKDDDLLKVSAFRAKGRVPVLSWIHPESQATITRCGQPLVGPNDKRCKEDEKYLQTIMDANA 356

  Fly   301 NTDYMYVVDTRPRINAMANRAAGKGYENEAFYENIKFHFLGIENIHVQRASLQKVLE----ACEQ 361
            .:..:.:.|.|....|..|:|.|.|||.|:.|.|.:..||.|.||||.|.||:|:.|    |.::
  Rat   357 QSHKLTIFDARQNSVADTNKAKGGGYECESAYPNAELIFLEIPNIHVMRESLRKLKEVVYPAIDE 421

  Fly   362 KSPTMSAFINALESSGWLKHIRSILDTSSFIANAVDKG-VSVVVHCSDGWDRTAQVCSLAQLMLN 425
                 |.:::.::.:.||::||.:|..:..||:.::.| .|||||||||||||.|:.|||.|||:
  Rat   422 -----SHWLSNVDGTHWLEYIRVLLAGAVRIADKIESGKTSVVVHCSDGWDRTPQLTSLAMLMLD 481

  Fly   426 PYYRTIKGFQALIEKDWLAFGHKFSERCGH---IQTDAREVSPIFTQFLDCTWQLMSQRSEAFEF 487
            .|||||.||:|||||:|::|||:|:.|.||   ...|| :.||||.||:||.||:..|...||||
  Rat   482 SYYRTIPGFEALIEKEWISFGHRFALRVGHGDDNHADA-DRSPIFLQFIDCVWQMTRQFPSAFEF 545

  Fly   488 NERFLLILHDHVHSCQFGTFVGNCEKDRLDLKLAERTFSLWGYMANHLNEYINPLYKPNVDEAIK 552
            ||.||:.:.||::||.||||:.|||:.|:...:..:|.|||.|:.:.|:|:.||.:.......:.
  Rat   546 NELFLIAILDHLYSCLFGTFLCNCEQQRVREDVCAKTLSLWSYINSQLDEFSNPFFVSYDHHVLY 610

  Fly   553 ANLAPQCIKFWRGMYSRFESGIHPREPLGDVLLDSKEHCNSLEDHVQHLTKRIASFKNYISKSAK 617
            ...:...::.|...|.|:...:.|:.|:...|.:.......|...|:.| :|.|:.:...|.|.:
  Rat   611 PVASVSRLELWVNYYVRWNPRMRPQMPIHQNLKELLAVKAELRKRVEDL-QREAAARTVPSSSER 674

  Fly   618 KLQDATSAP 626
            ......|||
  Rat   675 GPSPTHSAP 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mtmr6NP_726322.1 PH-GRAM_MTMR6-like 78..173 CDD:270030 21/103 (20%)
PTP-MTMR6-like 202..501 CDD:350380 141/308 (46%)
FYVE_MTMR_unchar 693..753 CDD:277277
Mtmr1XP_063133525.1 None
Blue background indicates that the domain is not in the aligned region.

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