DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3530 and Mtmr2

DIOPT Version :9

Sequence 1:NP_726322.1 Gene:CG3530 / 37707 FlyBaseID:FBgn0028497 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_001101593.1 Gene:Mtmr2 / 315422 RGDID:1311865 Length:643 Species:Rattus norvegicus


Alignment Length:637 Identity:226/637 - (35%)
Similarity:350/637 - (54%) Gaps:75/637 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TSALRLSFDNISPETEEPPDGNKRLWGVPVPPFVSEKVVSWIEEEFNEAPVFYNGNSVLKKVENV 84
            :.::..|.||.||:.....:.||          ::|.          |.|....|.::....::|
  Rat    47 SDSISTSADNFSPDLRVLREANK----------LAEM----------EEPALLPGENIKDMAKDV 91

  Fly    85 RMIDRYNTKNPTVGTLYLTATHLIF--VEPDSNKETWILHMH---VASIEKL-PLSTTGS---PL 140
            ..|..:.  ....|||.:|...|.|  :|.|   ..::|...   ::.:||: ..|:.|.   .|
  Rat    92 TYICPFT--GAVRGTLTVTNYRLYFKSMERD---PPFVLDASLGVISRVEKIGGASSRGENSYGL 151

  Fly   141 LIRCKTFLSVTFV-IPKDSECHDVYTSLLKLFQPVSIN-KLYCFNYQPNKDDFPKNAGWDYFKLE 203
            ...||...::.|. .|:......::.:|:|...|||.. .|:.|.|   |:.||:| ||..:...
  Rat   152 ETVCKDIRNLRFAHKPEGRTRRSIFENLMKYAFPVSNGLPLFAFEY---KEVFPEN-GWKLYDPL 212

  Fly   204 AEFKHMLVPNEAWTLCSMNEKYELCDTYPRQIYVPKEATTLMLISSSRFRSKGRLPVLTYLH-NN 267
            .|::...:|||:|.:..:||:||||||||..:.||.......|...:.|||:||:|||:::| .:
  Rat   213 LEYRRQGIPNESWRITKVNERYELCDTYPALLAVPANIPDEELKRVASFRSRGRIPVLSWIHPES 277

  Fly   268 KASICRCSQPLSGFSA-RCLEDEQMLEAIRKTNSNTDYMYVVDTRPRINAMANRAAGKGYENEAF 331
            :|::.|||||:.|.|. |..|||:.|:||..:|:.:..:::.|.||.:||:||:|.|.|||:|..
  Rat   278 QATVTRCSQPMVGVSGKRSKEDEKYLQAIMDSNAQSHKIFIFDARPSVNAVANKAKGGGYESEDA 342

  Fly   332 YENIKFHFLGIENIHVQRASLQKVLEACEQKSPTM--SAFINALESSGWLKHIRSILDTSSFIAN 394
            |:|.:..||.|.||||.|.||:|:.|..   .|.:  :.:::.|||:.||:||:.||..:..||:
  Rat   343 YQNAELVFLDIHNIHVMRESLRKLKEIV---YPNIEETHWLSNLESTHWLEHIKLILAGALRIAD 404

  Fly   395 AVDKG-VSVVVHCSDGWDRTAQVCSLAQLMLNPYYRTIKGFQALIEKDWLAFGHKFSERCGH--- 455
            .|:.| .|||||||||||||||:.|||.|||:.|||||:||:.|:||:||:|||:|..|.||   
  Rat   405 KVESGKTSVVVHCSDGWDRTAQLTSLAMLMLDGYYRTIRGFEVLVEKEWLSFGHRFQLRVGHGDK 469

  Fly   456 IQTDAREVSPIFTQFLDCTWQLMSQRSEAFEFNERFLLILHDHVHSCQFGTFVGNCEKDRLDLKL 520
            ...|| :.||:|.||:||.||:..|...||||||.||:.:.||::||.||||:.|.|:.|....|
  Rat   470 NHADA-DRSPVFLQFIDCVWQMTRQFPTAFEFNEYFLITILDHLYSCLFGTFLCNSEQQRGKENL 533

  Fly   521 AERTFSLWGYMANHLNEYINPLYKPNVDEAIKANLAPQCIKFWRGMYSRFESGIHPREPLGDVLL 585
            .::|.|||.|:.:.|.::.|||:....:..:....:.:.::.|.|.|.|:...:.|:||:     
  Rat   534 PKKTVSLWSYINSQLEDFTNPLFGSYSNHVLYPVASMRHLELWVGYYIRWNPRMKPQEPI----- 593

  Fly   586 DSKEHCNSLEDHVQHLTKRIASFKNYISKSAKKLQDATSAPGKVNKELSSNE 637
                       |.::  |.:.:.:..:.:..::||...|     |:..||:|
  Rat   594 -----------HSRY--KELLAKRTELQRKVEELQREIS-----NRSTSSSE 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3530NP_726322.1 PH-GRAM_MTMR6-like 78..173 CDD:270030 22/104 (21%)
Myotub-related 179..514 CDD:284109 163/342 (48%)
FYVE_MTMR_unchar 693..753 CDD:277277
Mtmr2NP_001101593.1 PH-like 73..187 CDD:418428 26/128 (20%)
Myotub-related 202..528 CDD:399535 158/330 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349488
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824298at2759
OrthoFinder 1 1.000 - - FOG0000303
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X213
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

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