DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3530 and mtmr2

DIOPT Version :9

Sequence 1:NP_726322.1 Gene:CG3530 / 37707 FlyBaseID:FBgn0028497 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_571446.1 Gene:mtmr2 / 30644 ZFINID:ZDB-GENE-990715-14 Length:620 Species:Danio rerio


Alignment Length:546 Identity:214/546 - (39%)
Similarity:321/546 - (58%) Gaps:27/546 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 PTVGTLYLTATHLIFVEPDSNKETWI-LHMHVAS-IEKLPLSTTGSPLL--IRCKTFLSVTFV-- 153
            |..|:|.:|...|.|...|......: |.:.|.| :||:..:|....:.  :.||...::.||  
Zfish    77 PIRGSLTVTNYRLFFRCTDREPVFGLDLPLGVLSRVEKIGAATGRGDVSYGLACKDMRNLRFVHK 141

  Fly   154 IPKDSECHDVYTSLLKLFQPVSIN-KLYCFNYQPNKDDFPKNAGWDYFKLEAEFKHMLVPNEAWT 217
            .|.||....|:..|:|...|||.| .|:.|.|   |..||:| ||..:...||.|...:|||:|.
Zfish   142 EPDDSLKKSVFEVLMKFAFP
VSNNMSLFAFEY---KQVFPEN-GWKVYDPLAECKRQGLPNESWR 202

  Fly   218 LCSMNEKYELCDTYPRQIYVPKEATTLMLISSSRFRSKGRLPVLTYLH-NNKASICRCSQPLSGF 281
            :..:|:.|||||:||..:.||...|...|...|.||:|||:|||:::| .::|::.|.|||:.|.
Zfish   203 ISKLNDHYELCDSYPATLVVPVTITDDELRRVSSFRAKGRIPVLSWIHPESQAAVVRSSQPMVGQ 267

  Fly   282 SA-RCLEDEQMLEAIRKTNSNTDYMYVVDTRPRINAMANRAAGKGYENEAFYENIKFHFLGIENI 345
            :. ||.|||::|:||...|:.:..:::.|.||.:||.||:..|.|:|:|..|:|.:..||.|.||
Zfish   268 NGRRCKEDEKLLQAIMDANAQSHKLFIFDARPSVNAAANKMKGGGFESEDAYQNAELVFLDIHNI 332

  Fly   346 HVQRASLQKVLEACEQKSPTM--SAFINALESSGWLKHIRSILDTSSFIANAVDKG-VSVVVHCS 407
            ||.|.||:|:.|..   .|.:  |.:::.|||:.||:||:.||..:..||:.|:.| .|||||||
Zfish   333 HVMRESLRKLKEVV---YPNIEESHWLSNLESTHWLEHIKLILAGALRIADKVESGKTSVVVHCS 394

  Fly   408 DGWDRTAQVCSLAQLMLNPYYRTIKGFQALIEKDWLAFGHKFSERCGHIQTDAREV--SPIFTQF 470
            ||||||||:.|||.:||:.:||||:|||.|:||:||:|||:|.:|.||...:..:|  ||||.||
Zfish   395 DGWDRTAQLTSLALIMLDSHYRTIRGFQILVEKEWLSFGHRFQQRVGHGDKNHTDVDRSPIFLQF 459

  Fly   471 LDCTWQLMSQRSEAFEFNERFLLILHDHVHSCQFGTFVGNCEKDRLDLKLAERTFSLWGYMANHL 535
            :||.||:..|...||||||.||:.:.||::||.||||:.|.|:.||..::.:||.|||.::.:.|
Zfish   460 IDCVWQMTRQFPAAFEFNEYFLITILDHLYSCLFGTFLCNSEQQRLKEEIPKRTVSLWSFVNSQL 524

  Fly   536 NEYINPLYKPNVDEAIKANLAPQCIKFWRGMYSRFESGIHPREPLGDVLLDSKEHCNSLEDHVQH 600
            .|::||||.......:...:..:.::.|...|.|:...:.|:||:.....:.......|:..|:.
Zfish   525 EEFVNPLYVHYSSHVLFPTVGIRHLQLWVSYYIRWNPRMRPQEPVHQRYKELLAKRAELQKRVEE 589

  Fly   601 LTKRIASFKNYISKSAKKLQDATSAP 626
            |.:.::      |::|....:...:|
Zfish   590 LQREVS------SRTASSSSERAGSP 609

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG3530NP_726322.1 PH-GRAM_MTMR6-like 78..173 CDD:270030 23/83 (28%)
Myotub-related 179..514 CDD:284109 162/341 (48%)
FYVE_MTMR_unchar 693..753 CDD:277277
mtmr2NP_571446.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48
PH-like 65..161 CDD:302622 23/83 (28%)
Myotub-related 168..503 CDD:284109 162/341 (48%)
Substrate binding. /evidence=ECO:0000250 306..309 1/2 (50%)