DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3530 and mtm-9

DIOPT Version :9

Sequence 1:NP_726322.1 Gene:CG3530 / 37707 FlyBaseID:FBgn0028497 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_504038.1 Gene:mtm-9 / 178790 WormBaseID:WBGene00003479 Length:569 Species:Caenorhabditis elegans


Alignment Length:577 Identity:179/577 - (31%)
Similarity:294/577 - (50%) Gaps:56/577 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 VENVRMIDRYNTKNP---TVGTLYLTATHLIFVE-------PDSNKETWILHMHVASIEKLPLS- 134
            :|..|:.|.:..|.|   .||.:.:...||||..       ||:.:|.|:||..|..:...|:| 
 Worm     7 IEVTRVRDAFMRKGPRPAQVGDICIFGHHLIFAPTTVGKEVPDNAEEFWLLHKAVDRVLCEPISK 71

  Fly   135 ---TTGSPLLIRCKTFLSVTFVIPKDSECHDVYTSLLKLFQPVSINKL---YCFNYQPN---KDD 190
               ..|..|.::||.||.:.|.|.....|.....::..|   .:||..   |.|.|...   .||
 Worm    72 ENPQRGGLLALKCKNFLLIIFEIGDLEICRATARTIE
SL---SNINGFLHDYAFFYNSPFTILDD 133

  Fly   191 FPKNAGWDYFKLEAEFKHMLVPNEAWTLCSMNEKYELCDTYPRQIYVPKEATTLMLISSSRFRSK 255
                 ||..|.||.||..:::..:|:.:.|:||.:.:|.|||.::.|||......|..|:.||..
 Worm   134 -----GWSAFDLEQEFARLMLSTDAFRISSVNENFAICPTYPEKLIVPKGIGDDYLKISATFREG 193

  Fly   256 GRLPVLTYLH-NNKASICRCSQPLSG-FSARCLEDEQMLEAIRKTNSNTDYMYVVDTRPRINAMA 318
            ||.|||:|.| ..|:.:.||||||.| .:.||.|||.:|.::...|..    |::|||.:.:|.|
 Worm   194 GRFPVLSYFHKETKSPLVRCSQPLIGPTNRRCREDETILNSMITVNRG----YIIDTRSKSSATA 254

  Fly   319 NRAAGKGYENEAFYENIKFHFLGIENIHVQRASLQKVLEACEQKSPTMSAFINALESSGWLKHIR 383
            .:|.|.|.|.:..|...::....|........:|.::::.|.::..|...:::.:..:|||..:.
 Worm   255 AKAKGGGAEPQGNYRQWRYIQCPIPRQREIHDALTRMVDVCSERKVTSDRWVSRVGQAGWLSSVA 319

  Fly   384 SILDTSSFIANAVD----KGVSVVVHCSDGWDRTAQVCSLAQLMLNPYYRTIKGFQALIEKDWLA 444
            :.|:.::.:|..:.    :.|.||:|..||.|.|....||||::|:...|||:||:::||::|:.
 Worm   320 ASLEAAANVAQCIYNERLEEVPVVIHGGDGLDSTLIASSLAQILLDADARTIRGFESVIEREWIC 384

  Fly   445 FGHKFSERCGHIQTDAREV-----SPIFTQFLDCTWQLMSQRSEAFEFNERFLLILHDHVHSCQF 504
            .||.||.|..|.......|     ||:|..|||...|:::|...:|||:|.||:.|.:|.::.:|
 Worm   385 GGHPFSLRNNHCAYAEGTVTGPFESPVFLVFLDAVHQMIAQYPMSFEFDENFLIFLFEHAYASEF 449

  Fly   505 GTFVGNCEKDRLDLKLAERTFSLWGYM--ANHLNEYINPLYKPNVDEAIKANLAPQCIKFWRGMY 567
            |:|:|||||::.|..:.::|.|||.::  ..::.:::|..|.| ....|..::||||||.|..::
 Worm   450 GSFLGNCEKEKKDNGIRKKTVSLWSHVHHPENMKQFVNVCYDP-TPGVIWPSIAPQCIKIWDRLF 513

  Fly   568 SRFESGIHPREPLGDVLLDSKEHCNSLEDH----VQHLTKRIASFKNYISKSAKKLQ 620
            .|::      .|.........|...||.||    .:.|..:.:|.:..:.:.:::|:
 Worm   514 FRWQ------RPDNSWSTPETETIQSLADHWKLREKELIAKASSLRRSVVELSRELR 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3530NP_726322.1 PH-GRAM_MTMR6-like 78..173 CDD:270030 30/105 (29%)
Myotub-related 179..514 CDD:284109 120/351 (34%)
FYVE_MTMR_unchar 693..753 CDD:277277
mtm-9NP_504038.1 PH-GRAM_MTMR9 1..108 CDD:275398 29/100 (29%)
Myotub-related 120..459 CDD:284109 120/347 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192248at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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