DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3530 and Mtm1

DIOPT Version :9

Sequence 1:NP_726322.1 Gene:CG3530 / 37707 FlyBaseID:FBgn0028497 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_001157662.1 Gene:Mtm1 / 17772 MGIID:1099452 Length:603 Species:Mus musculus


Alignment Length:640 Identity:227/640 - (35%)
Similarity:347/640 - (54%) Gaps:88/640 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NKFNEIERQLSPTSALRLSFDNISPETEEPPDGNKRLWGVPVPP---FVSEKVVSWIEEEFNEAP 69
            :|:|  ...|...|..::|.|.:|.:..|.         ||..|   .::||.|.:|      .|
Mouse     7 SKYN--SHSLENESIKKVSQDGVSQDVSET---------VPRLPGELLITEKEVIYI------CP 54

  Fly    70 VFYNGNSVLKKVENVRMIDRYNTKNPTVGTLYLT--ATHLIFVEPDSNKETWILHMH---VASIE 129
              :||                    |..|.:|:|  ..:|..:|.||   ..||.:.   ::.||
Mouse    55 --FNG--------------------PIKGRVYITNYRLYLRSLETDS---ALILDVPLGVISRIE 94

  Fly   130 KLPLSTTGSP----LLIRCKTFLSVTFVIPKDSEC-HDVYTSLLKLFQPVSIN-KLYCFNYQPNK 188
            |:..:|:...    |.|.||...::.|.:.::... .|::..|:|...|::.| .|:.|   .|:
Mouse    95 KMGGATSRGENSYGLDITCKDLRNLRFALKQEGHSRRDMFEILVKHAFPLAHNLPLFAF---VNE 156

  Fly   189 DDFPKNAGWDYFKLEAEFKHMLVPNEAWTLCSMNEKYELCDTYPRQIYVPKEATTLMLISSSRFR 253
            :.|..: ||..:....|::...:||..|.:..:|:.||||:|||..:.||...:...|...:.||
Mouse   157 EKFNVD-GWTVYNPVEEYRRQGLPNHHWRISFINKCYELCETYPALLVVPYRTSDDDLRRIATFR 220

  Fly   254 SKGRLPVLTYLH-NNKASICRCSQPLSGFSA-RCLEDEQMLEAIRKTNSNTDYMYVVDTRPRINA 316
            |:.|||||:::| .||..|.||||||.|.|. |..:||:.|:.||:||..|..:.:.|.||.:||
Mouse   221 SRNRLPVLSWIHPENKMVIMRCSQPLVGMSGKRNKDDEKYLDVIRETNKQTSKLMIYDARPSVNA 285

  Fly   317 MANRAAGKGYENEAFYENIKFHFLGIENIHVQRASLQKVLEACEQKSPTM--SAFINALESSGWL 379
            :||:|.|.|||::..|:|.:..||.|.||||.|.||:||.:..   .|.:  |.::::|||:.||
Mouse   286 VANKATGGGYESDDAYQNSELSFLDIHNIHVMRESLKKVKDIV---YPNIEESHWLSSLESTHWL 347

  Fly   380 KHIRSILDTSSFIANAVDKG-VSVVVHCSDGWDRTAQVCSLAQLMLNPYYRTIKGFQALIEKDWL 443
            :||:.:|..:..:|:.|..| .||:||||||||||||:.|||.|||:.:||||:||:.|::|:|:
Mouse   348 EHIKLVLTGAIQVADQVSSGKSSVLVHCSDGWDRTAQLTSLAMLMLDSFYRTIEGFEILVQKEWI 412

  Fly   444 AFGHKFSERCGH---IQTDAREVSPIFTQFLDCTWQLMSQRSEAFEFNERFLLILHDHVHSCQFG 505
            :|||||:.|.||   ...|| :.||||.||:||.||:..|...||||||.||:.:.||::||:||
Mouse   413 SFGHKFASRIGHGDKNHADA-DRSPIFLQFIDCVWQMSKQFPTAFEFNEGFLITVLDHLYSCRFG 476

  Fly   506 TFVGNCEKDRLDLKLAERTFSLWGYMANHLNEYINPLYKPNVDEAIKANLAPQCIKFWRGMYSRF 570
            ||:.||:..|...||.|||.|||..:.::.:::.||.|...::..:....:.:.::.|...|.|:
Mouse   477 TFLFNCDSARERQKLTERTVSLWSLINSNKDKFKNPFYTKEINRVLYPVASMRHLELWVNYYIRW 541

  Fly   571 ESGIHPREPLGDVLLDSKEHCNSLEDHVQHLTKRIASFKNYISKSAKKLQDATSA 625
            ...:..::|            |.:|.....|   :|...:|| |..::||.|.||
Mouse   542 NPRVKQQQP------------NPVEQRYMEL---LALRDDYI-KRLEELQLANSA 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3530NP_726322.1 PH-GRAM_MTMR6-like 78..173 CDD:270030 22/104 (21%)
Myotub-related 179..514 CDD:284109 157/342 (46%)
FYVE_MTMR_unchar 693..753 CDD:277277
Mtm1NP_001157662.1 PH-like 44..143 CDD:302622 29/129 (22%)
Myotub-related 150..483 CDD:284109 156/340 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824298at2759
OrthoFinder 1 1.000 - - FOG0000303
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1956
SonicParanoid 1 1.000 - - X213
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.950

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