DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3530 and mtm-6

DIOPT Version :9

Sequence 1:NP_726322.1 Gene:CG3530 / 37707 FlyBaseID:FBgn0028497 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_871680.1 Gene:mtm-6 / 176757 WormBaseID:WBGene00003478 Length:782 Species:Caenorhabditis elegans


Alignment Length:681 Identity:291/681 - (42%)
Similarity:422/681 - (61%) Gaps:62/681 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 VENVRMIDRYNTKNPTVGTLYLTATHLIFVEPDSNKETWILHMHVASIEKLPLSTTGSPLLIRCK 145
            |:.|.::||...:...|||:::|.||:||...:.:||.|:....::|:||..|:..|..|:||||
 Worm   117 VDKVCLVDRLGCQENLVGTVHVTTTHIIFRAENGSKELWLATGLISSVEKGTLTAAGCMLVIRCK 181

  Fly   146 TFLSVTFVIPKDSECHDVYTSLLKLFQPVSIN--KLYCF-NYQPNKDDFPKNAGWDYFKLEAEFK 207
            .|..:|.:|.:|..|.|:|.:|.:..:|||:|  :|..| |.:|.:|    ..||......:|..
 Worm   182 HFQVITLLISRDKSCQDLYETLQRAAKPVSVNVTELLAFENREPVED----VRGWRRLDWNSEMT 242

  Fly   208 HMLVPNEAWTLCSMNEKYELCDTYPRQIYVPKEATTLMLISSSRFRSKGRLPVLTYLH-NNKASI 271
            ...:....||..::||.|.:|||||.:::.|..|:|.:|:.|.:|||:||||||||.| ..:|::
 Worm   243 RQGITKSQWTESNINEGYTICDTYPNKLWFPTAASTSVLLGSCKFRSRGRLPVLTYFHQQTEAAL 307

  Fly   272 CRCSQPLSGFSARCLEDEQMLEAIRKTNSNTDYMYVVDTRPRINAMANRAAGKGYENEAFYENIK 336
            |||:|||:||||||:|||:::|.:.|.|:|:|.:::||||||:|||.|:..|||:|:|..|.|::
 Worm   308 CRCAQPLTGFSARCVEDEKLMELVGKANTNSDNLFLVDTRPRVNAMVNKVQGKGFEDERNYSNMR 372

  Fly   337 FHFLGIENIHVQRASLQKVLEACEQKSPTMSAFINALESSGWLKHIRSILDTSSFIANAVDKGVS 401
            |||..||||||.|||..::|:|. .|...::.:...||:||||||:||:::.|.|:|.::.:|.|
 Worm   373 FHFFDIENIHVMRASQARLLDAV-TKCRDVTEYWKTLEASGWLKHVRSVVECSLFLAESISRGTS 436

  Fly   402 VVVHCSDGWDRTAQVCSLAQLMLNPYYRTIKGFQALIEKDWLAFGHKFSERCGHI----QTDARE 462
            .|||||||||||:||.:|.||:|:||||||.|||.|||||||.|||||.:||||:    ....:|
 Worm   437 CVVHCSDGWDRTSQVVALCQLLLDPYYRTIHGFQVLIEKDWLGFGHKFDDRCGHVGALNDEAGKE 501

  Fly   463 VSPIFTQFLDCTWQLMSQRSEAFEFNERFLLILHDHVHSCQFGTFVGNCEKDRLDLKLAERTFSL 527
            |||||||:|||.||:|.|:..||:||||:|:.:|:||:|||||||:|||:|||.||.|::||.||
 Worm   502 VSPIFTQWLDCIWQIMQQKPRAFQFNERYLIEMHEHVYSCQFGTFIGNCDKDRRDLNLSKRTKSL 566

  Fly   528 WGYMANHLNEYINPLYKPNVDEAIKANLAPQCIKF--WRGMYSRFESGIHPREPLGDVLLDSKEH 590
            |.:|....::|:||.|.|....|: .:|..:..:|  |..||:||::|:.|||.|.|:.:.:.||
 Worm   567 WTWMDARHDDYMNPFYSPTAHVAL-LDLDTRAARFTVWTAMYNRFDNGLQPRERLEDLTMAAMEH 630

  Fly   591 CNSLEDHVQHLTKRIASFKNYISKSAKKLQDATSAPGKVNKELSSNEINDNKYNYDKKLSELSAA 655
            ...||.||..|..|:|..|.                 :.|::::|.....|..:     |.:|:|
 Worm   631 VGVLESHVAQLRTRLAELKT-----------------QQNQQITSTNTPTNMVD-----SGMSSA 673

  Fly   656 DDD-------HPLKASNMSFASLSLSAEQSS---------PPQALPEEINSVAVDWKPMRNVTTC 704
            .||       |||...:.:...|..:..|.|         |.:||    ...::.|:|:|....|
 Worm   674 TDDLKNLSLSHPLDPLSSTLPILERATSQESGVMDSSLYYPDEAL----TKYSLKWQPLRGADRC 734

  Fly   705 S---CSTPFDQ-FSKKTHCWRCGDIFCERCI 731
            |   |...|.. ..::.||..||.|||.||:
 Worm   735 SNPACRGEFSSTIERRIHCHLCGMIFCRRCL 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3530NP_726322.1 PH-GRAM_MTMR6-like 78..173 CDD:270030 33/91 (36%)
Myotub-related 179..514 CDD:284109 180/340 (53%)
FYVE_MTMR_unchar 693..753 CDD:277277 16/43 (37%)
mtm-6NP_871680.1 PH-like 117..209 CDD:388408 33/91 (36%)
PTP-MTMR6-like 237..540 CDD:350380 163/303 (54%)
FYVE 724..782 CDD:214499 16/42 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158645
Domainoid 1 1.000 401 1.000 Domainoid score I371
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56848
Inparanoid 1 1.050 570 1.000 Inparanoid score I576
Isobase 1 0.950 - 0 Normalized mean entropy S1948
OMA 1 1.010 - - QHG49274
OrthoDB 1 1.010 - - D192248at33208
OrthoFinder 1 1.000 - - FOG0000303
OrthoInspector 1 1.000 - - oto17980
orthoMCL 1 0.900 - - OOG6_101828
Panther 1 1.100 - - LDO PTHR10807
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1956
SonicParanoid 1 1.000 - - X213
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.890

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