DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mtmr6 and Mtmr4

DIOPT Version :10

Sequence 1:NP_726322.1 Gene:Mtmr6 / 37707 FlyBaseID:FBgn0028497 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_001389523.1 Gene:Mtmr4 / 170749 MGIID:2180699 Length:1204 Species:Mus musculus


Alignment Length:795 Identity:221/795 - (27%)
Similarity:342/795 - (43%) Gaps:197/795 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RLSFDNISPETEEPPDGNKRLWGVPV-PPFVSEKVVSWIEEEFNEAPVFYNGNSVLKKVENVRMI 87
            |:|...:|...||.|...:.:....: ||   :::|.  |||..:.|.     :||:. |.|..:
Mouse     6 RVSCSMLSCFGEEGPPSLEYIQAKDLFPP---KELVK--EEENLQVPF-----TVLQG-EGVEFL 59

  Fly    88 DRYNTKNPTVGTLYLTATHLIFVEP---------DSNKETWILHMHVASIEKLPLSTTGSPLLIR 143
            .|.......:....|   |:.|.:.         ||.:...:..:|:|..:.         .::|
Mouse    60 GRATDALIAISNYRL---HIKFKDSVINVPLRMIDSVESRDMFQLHIACKDS---------KVVR 112

  Fly   144 C--KTFLSVTFVIPKDSECHDVYTSLLK-LFQPVSINKLYCFNYQPNKDDFPKNAGWDY-FKLEA 204
            |  .||          .:|.:..:.|.: ..:|.....|:.|.|.          .|.. ...|.
Mouse   113 CHFSTF----------KQCQEWLSRLSRATARPAKPEDLFAFAYH----------AWCLGLTEED 157

  Fly   205 EFKHMLVPNE-------------------AWTLCSMNEKYELCDTYPRQIYVPKEATTLMLISSS 250
            :..|:..|.|                   .|.:..:|..|:||.:||:::.||...|...|.:.:
Mouse   158 QHTHLCQPGEHIRCRQEAELARMGFDLQNVWRVSHINSNYKLCPSYPQKLLVPVWITDKELENVA 222

  Fly   251 RFRSKGRLPVLTYLH-NNKASICRCSQP-LSGFSARCLEDEQMLEAIRK---------------- 297
            .|||..|:||:.|.| .|.|:|.||||| :|.:..|..:||.::.:|.|                
Mouse   223 SFRSWKRIPVVVYRHLRNGAAIARCSQPEISWWGWRNADDEYLVTSIAKACALDPGTRASGGSLS 287

  Fly   298 --TNS-----NTDY------------------MYVVDTRPRINAMANRAAGKGYENEAFYENIKF 337
              ||.     :||:                  :.::|.|....|:||||.|.|.|.|.:|.|.:.
Mouse   288 TGTNDASEACDTDFDSSLTACSGVESTAAPQKLLILDARSYTAAVANRAKGGGCECEEYYPNCEV 352

  Fly   338 HFLGIENIHVQRASLQKVLEACEQKSPTMSAFINALESSGWLKHIRSILDTSSFIANAVDK-GVS 401
            .|:|:.|||..|.|.|.:...|.| .|..|.:::||||:.||:|:..:|..:..:||.||: |..
Mouse   353 LFMGMANIHAIRNSFQYLRAVCSQ-MPDPSNWLSALESTKWLQHLSVMLKAAVLVANTVDREGRP 416

  Fly   402 VVVHCSDGWDRTAQVCSLAQLMLNPYYRTIKGFQALIEKDWLAFGHKFSERCGHIQT--DAREVS 464
            |:||||||||||.|:.:||:::|:|||||::|||.|:|.|||.|||||.:||||.:.  |..|..
Mouse   417 VLVHCSDGWDRTPQIVALAKILLDPYYRTLEGFQVLVESDWLDFGHKFGDRCGHQENAEDQNEQC 481

  Fly   465 PIFTQFLDCTWQLMSQRSEAFEFNERFLLILHDHVHSCQFGTFVGN--CEKDRLDLKLAERTFSL 527
            |:|.|:||...||:.|....|||||.||:.|..|.:||.:|||:.|  ||:::.:  :.:||.|:
Mouse   482 PVFLQWLDSVHQLLKQFPCLFEFNEAFLVKLVQHTYSCLYGTFLANNPCEREKRN--IYKRTCSV 544

  Fly   528 WGYMANHLNEYINPLYKPNVDEAIKANLAPQCIKFWRGMYSRFESGIHPREPLGDVLLDSKEHCN 592
            |..:......:.|.||.|..|..:......:.:..|..:|                 |.:...|.
Mouse   545 WALLRAGNKNFHNFLYTPGSDVVLHPVCHVRALHLWTAVY-----------------LPASSPCT 592

  Fly   593 SLEDHVQHLTKRIASFKNYISKSAKKLQDATSAPGKVNKELSSNEINDNKYNYDKKLSELSAADD 657
            ..|:::......:|..:.:..:|..:|.          |..|.:::             |||.|.
Mouse   593 LGEENMDLYLSPVAQSQEFSGRSLDRLP----------KTRSMDDL-------------LSACDT 634

  Fly   658 DHPLKAS----NMSFASL----SLSAEQSSP-------------PQ------ALPEEINSVAVDW 695
            ..||..:    |::..|.    ||....|||             ||      .||..:.|...::
Mouse   635 SSPLTRTSSDPNLNNHSQEVRGSLEPWHSSPEGAETVIDSGVGSPQLTVGEMGLPPPLPSSQKEY 699

  Fly   696 ---KPMRNVTTCSCS 707
               ||.:...:||.|
Mouse   700 LSNKPFKGHKSCSLS 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mtmr6NP_726322.1 PH-GRAM_MTMR6-like 78..173 CDD:270030 17/106 (16%)
PTP-MTMR6-like 202..501 CDD:350380 135/363 (37%)
FYVE_MTMR_unchar 693..753 CDD:277277 5/18 (28%)
Mtmr4NP_001389523.1 PH-GRAM_MTMR4 37..150 CDD:270150 27/152 (18%)
PTP-MTMR4 186..493 CDD:350435 119/307 (39%)
FYVE_MTMR4 1120..1179 CDD:277272
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.