DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3530 and mtmr10

DIOPT Version :9

Sequence 1:NP_726322.1 Gene:CG3530 / 37707 FlyBaseID:FBgn0028497 Length:761 Species:Drosophila melanogaster
Sequence 2:NP_001123828.1 Gene:mtmr10 / 100170581 XenbaseID:XB-GENE-1002518 Length:764 Species:Xenopus tropicalis


Alignment Length:834 Identity:189/834 - (22%)
Similarity:315/834 - (37%) Gaps:242/834 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 DNISPETEEPPDGNKRLWGVPVPPFVSEKVVSWIEEEFNEAPVFYN--GNSVLKK------VENV 84
            |.::|||:     .|:|..|.:|..:....|:::.:........|:  |..|...      .||.
 Frog    22 DKLNPETK-----IKKLKPVLLPGEIVVNEVNFVRKCIASDTSQYDLWGKLVCTNFKISFITENS 81

  Fly    85 RMIDRYNTKNPTVG--TLYLTATHLIFVEPDSNKETWILHMHVASIEKLPLSTTGSPLLIRCKTF 147
            ....|::.||..:|  .:.||....|.|..|:.::..||..:    :||..:.|  .|:|.||.|
 Frog    82 VPFQRFHYKNLLLGEHDVPLTCIEQIVVVNDTKRKQKILSHN----QKLKFNPT--ELIIYCKDF 140

  Fly   148 LSVTFVI----PKDSECHDVYTSLLKLFQPVSINKLYCFNY---------------QPNKDDFPK 193
            ..:.|..    |:.::  .|..:|....||..:..|:.|.|               .|...||.:
 Frog   141 RILRFRFDEAGPESAK--KVCLALAHYSQPTDLQLLFAFEYVAQMYHNPADKVNGIDPGGGDFCQ 203

  Fly   194 N-------AGWDYFKLEAEFKHMLVPNEAWTLCSMNEKYELCDTYPRQIYVPKEATTLMLISSSR 251
            .       :.||     .|.|.....:  |.:||:||.|.:....|....||.......|...|.
 Frog   204 RTPLFETYSDWD-----REIKRTGASD--WRVCSVNEGYMISTCLPEYFVVPSSLADQDLKQYSH 261

  Fly   252 FRSKGRLPVLTYLHNNKASICRCSQPLSGFSARCLEDEQMLEAIRKTNSNTDYMYVVDTRPRINA 316
            .....|:|:..:.|:|.:::.|.:........|.: |:::...|.:::.....:|..|       
 Frog   262 AFVGRRMPLWCWNHSNGSALVRMASIKDLLQLRKI-DQRVCSGITRSHPLRSDVYKCD------- 318

  Fly   317 MANRAAGKGYENEAFYENIKFHFLGIENIHVQRASLQKVLEAC--EQKSPTMSAFINALESSGWL 379
                              :..:..||::|||   :..|:.:.|  |....|...::::||::.||
 Frog   319 ------------------LDHNVPGIQDIHV---AFSKLRQLCVNEPFDETEEKWLSSLENTRWL 362

  Fly   380 KHIRSILDTSSFIANAVD-KGVSVVVHCSDGWDRTAQVCSLAQLMLNPYYRTIKGFQALIEKDWL 443
            :.:|:.|..::.:...:| ...|||:...:|.|.:..|.||.||||:||:|||.|||:||:|:|:
 Frog   363 EFVRTFLKQAAELVYMLDFSRRSVVLQEEEGRDVSCLVASLVQLMLDPYFRTIVGFQSLIQKEWV 427

  Fly   444 AFGHKFSERCGHIQTDAREVSPIFTQFLDCTWQLMSQRSEAFEFNERFLLILHDHVHSCQFGTFV 508
            ...:.|.:||.|::...:| ||:|..||||.|||:.|...||:|.|.:|.:|||...:..||||:
 Frog   428 MSAYPFLDRCNHLKRSEKE-SPLFVLFLDCVWQLLQQYPAAFQFTETYLTVLHDSTRNSLFGTFL 491

  Fly   509 GNCEKDRL----------DLKLAE----RTFSLWG----YMANHLNEYINPLY------------ 543
            .|....|:          :::|.|    :..|:|.    :.|.....:.||||            
 Frog   492 FNSPHQRVQQSTEFAIGKNIQLGEEKGLKFPSVWDWSLQFSAKDRALFNNPLYIGKSVPCVQNGA 556

  Fly   544 -------KPNVDEAIKA------------------------NLAPQ------------------- 558
                   |.|....::.                        .|.|:                   
 Frog   557 VKSFKRTKKNYSSTMRGMPPSLKNGLVIQQEIMPRRNSLILKLKPEILQQVPVMPSNGFEQYLRD 621

  Fly   559 --------------C-----IKFWRGMYSRF--ESGIHPREPLGDVLLDSKEHCNSLEDHVQHLT 602
                          |     ||.|:..|.|:  |:.|:.    |..:: :.:..:.|...::.|.
 Frog   622 WFSKPADLHGVILPCLHGTHIKIWKLCYLRWTPEAQINH----GGFIM-AFQRISILASEIELLQ 681

  Fly   603 KRIASFKNYISKSAKKLQDATSAPGKVNKELSSNEINDNKYNYDKKLSELSAADDDHPLKASNMS 667
            .|:..::.|      .|.:|||..|:.|:.....|:                      |.:||.|
 Frog   682 SRLRQYRGY------PLSNATSPAGEQNRMFFRPEV----------------------LHSSNES 718

  Fly   668 FASLSLSAEQSSPPQALPEEINSVAVDWKPMRNVTTCS-CSTPFDQFSKKTHCW 720
            ...||     ||.|             :.|:.|:...| ..||..:|......|
 Frog   719 LDILS-----SSFP-------------FSPIGNLCRRSILGTPLSKFLNGAKIW 754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3530NP_726322.1 PH-GRAM_MTMR6-like 78..173 CDD:270030 25/106 (24%)
Myotub-related 179..514 CDD:284109 100/359 (28%)
FYVE_MTMR_unchar 693..753 CDD:277277 7/29 (24%)
mtmr10NP_001123828.1 PH-GRAM_MTMR10 20..196 CDD:270154 42/186 (23%)
Myotub-related 174..494 CDD:284109 99/356 (28%)
3-PAP 565..693 CDD:289355 16/138 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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